| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1154 |
|---|
| Symbol | |
|---|
| ID | 8357270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1378130 |
|---|
| End bp | 1379980 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644963310 |
|---|
| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
|---|
| Protein accession | YP_003120853 |
|---|
| Protein GI | 256420200 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.999531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATA CTTCGGTTCA ACAGATAGAA GATGTAGTGA TAAAATTTGC TGGCGACAGT
GGAGACGGTA TGCAGTTGAC TGGTACGCAG TTTTCCAATA ACACCGCGTT GATCGGCAAT
GACCTTAGCA CATTCCCGGA TTTCCCGGCA GAAATACGCG CCCCGCAGGG AACCCTTGCA
GGCGTGAGCG GCTTCCAGCT GCACTTTTCC TCTAACCGTA TTTTCACTCC CGGCGACGCC
TGTGACGTAC TGGTGGCGAT GAACGCAGCT GCGTTGAAAG CTAACCTGAA AAGCCTGAAA
AAGGGTGGTA TCATCATCGC TAACACCGAT GGTTTCGATG CCAAGAACCT GCGTCTGGCT
AACTATCCTG ATGGCGTAAA TCCGCTGGAA GACGGTTCCC TGCAGTCTTA TCAGCTGCAC
ACCATGGACG TTACCAAAAT GACCCGTGAA GCATTGAAAG AATCAAGCAT GGGTATGAAG
GAAAAAGACC GTGCAAAGAA CATGTTTGTA CTGGGCTTCC TTTATTGGTT GTACGACCGT
AACATGGAAA GCACCGAGAA CTTCCTGAAT GAGAAATTCG GCAAGAAGCC GGATATCCTC
GATAGTAACC TGAAGGTATT ACATGCGGGT TATAACTTCG CGGAAACAGT AGAAGCGTTC
AGCACCCGTT TCCGTGTGGA AAAAGCACGT ATGGAGCCAG GTACTTACCG CAGTATCACT
GGTAATACCG CCCTGGCCTA CGGTCTGATC GCCGCCAGCC AGAAGGCTAG TCTGCCGCTG
TTCCTGGGTA CTTATCCAAT CACACCGGCT TCCGACATCC TGCATGAACT GAGCCGTTAT
AAAAACTTTG GTATCCGTAC TTTCCAGGCG GAAGATGAAA TTGCCGGTAT TACTTCCGCA
ATTGGCGCTT CCTATGGTGG ACATATGGGG GTTACAACTA CCTCCGGTCC GGGTATGGCA
CTGAAAGGTG AAGCAATGGG TCTGGCGGTC ATGCTGGAAA TTCCACTGCT GATCATCAAT
ATCCAGCGTG GTGGTCCTTC AACAGGGCTG CCTACCAAAA CAGAACAATC TGACCTTTTA
CAGGCTTATT ATGGTCGTAA TGGTGAGTGT CCGATGCCGA TCGTATCTGC CTCTACACCA
TCAGACTGTT TCAGCGCAGT ATTTGAGGCA TTCCGCATCT CAATTGCACA TATGACGCCG
GTGATCCTGC TGAGTGATGG TTATATCGCG AATGGTGCTG AGCCATGGCG TTTCCCACAG
AGCAAAGATC TGCCTGCTAT TCCTGTAACG TTCAAAAAAG GACTGGAAGA TCACGAAGAG
CAGTTCCTGC CTTATCACCG TGATGAAAAC CTCGTACGTC CATGGGCAGT ACCAGGTACG
CCGGGTCTGG AGCACCGTAT CGGTGGTCTG GAAAAACAGA ACATTACCGG TAATGTGAGC
TATGATCCGG AAAACCATGA GTTAATGGTG CGTATCCGTC AGGAGAAAGT GGACAAAATC
GCTGATCATA TTCCTCCGCA GACGATCGAA CTCGGACCTG AAAAAGGTAA GGTACTGGTA
CTCGGATGGG GTTCTACTTA TGGTGCGATT AAGAGCGCTG TACTGGAACT ACTGGCGGAA
GGGCATGAAG TGGCGCACGC ACACATCAGA TACCTGCGTC CATTCCCTAA AAATCTGGCA
GAAATACTGC ATAGCTATGA TAAAGTACTG ATTCCTGAGA TCAACAATGG TCAGCTGATC
AAGATCATCC GTGAGCAGTT CCTGATCGAT GCAGTTGGTT ACAATAAAAT AATGGGAGTA
CCTATTACTA AAGGAGAACT GGTAATCAAG ATCAAAGAGA TGTTGCAGTA G
|
|---|
| Protein sequence | MSNTSVQQIE DVVIKFAGDS GDGMQLTGTQ FSNNTALIGN DLSTFPDFPA EIRAPQGTLA
GVSGFQLHFS SNRIFTPGDA CDVLVAMNAA ALKANLKSLK KGGIIIANTD GFDAKNLRLA
NYPDGVNPLE DGSLQSYQLH TMDVTKMTRE ALKESSMGMK EKDRAKNMFV LGFLYWLYDR
NMESTENFLN EKFGKKPDIL DSNLKVLHAG YNFAETVEAF STRFRVEKAR MEPGTYRSIT
GNTALAYGLI AASQKASLPL FLGTYPITPA SDILHELSRY KNFGIRTFQA EDEIAGITSA
IGASYGGHMG VTTTSGPGMA LKGEAMGLAV MLEIPLLIIN IQRGGPSTGL PTKTEQSDLL
QAYYGRNGEC PMPIVSASTP SDCFSAVFEA FRISIAHMTP VILLSDGYIA NGAEPWRFPQ
SKDLPAIPVT FKKGLEDHEE QFLPYHRDEN LVRPWAVPGT PGLEHRIGGL EKQNITGNVS
YDPENHELMV RIRQEKVDKI ADHIPPQTIE LGPEKGKVLV LGWGSTYGAI KSAVLELLAE
GHEVAHAHIR YLRPFPKNLA EILHSYDKVL IPEINNGQLI KIIREQFLID AVGYNKIMGV
PITKGELVIK IKEMLQ
|
|---|
| |