Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1142 |
Symbol | |
ID | 8357258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1363274 |
End bp | 1363882 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644963298 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003120841 |
Protein GI | 256420188 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.180703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.158777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATAC AGGAACGTAT TCTGGATACT GCATTCAGTC TGTTCTGCCA GTTCGGAACA CGCTCAATCA CAATGGATGA TATCGCTCAG CGTATGGGTG TATCCAAAAA GACCCTGTAT GCTCACTTTG CAGATAAAGA TGAACTGGTG ATGCACGCCA TAGCGCGGTA TCTGCAACAA CTGGATAAGG AATGTATTGA AAATCAGGAG AAAGCCGCGA ACGCCATAGA CGAACTATTC CTCGTCATGA AACAGCTGGA TATGAGCTTC CGTAATATGA ACCCGATCAT CCTGTTCGAT CTGCAAAAGT TCCATACGAA AGCGTACCAG GTATTTCAGG ATTATAAGAA TAACAACCTG CAAAAAACCG TAAGACTGAA TTTAGAAAGA GGCGTACGTG AAGGATTATA TAGAAATGAT TTTGATATCG AAATAATGAC CCAGTACAGA CTGGCTACTT CCATGCTATG TTTTCAGCCT GACATATTCC CTTACGGGAA ATATGACATG AGCAAAGTAC AATGTATTCT GCTGGAACAT TTCCTGTACG GACTTGTTTC TCCCGAAGGC TACAAACGCG TGGAAGAGAA TAAACTACAA CTATCGTAA
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Protein sequence | MEIQERILDT AFSLFCQFGT RSITMDDIAQ RMGVSKKTLY AHFADKDELV MHAIARYLQQ LDKECIENQE KAANAIDELF LVMKQLDMSF RNMNPIILFD LQKFHTKAYQ VFQDYKNNNL QKTVRLNLER GVREGLYRND FDIEIMTQYR LATSMLCFQP DIFPYGKYDM SKVQCILLEH FLYGLVSPEG YKRVEENKLQ LS
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