Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1135 |
Symbol | |
ID | 8357251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1354552 |
End bp | 1355214 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963291 |
Product | YceI family protein |
Protein accession | YP_003120834 |
Protein GI | 256420181 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.387208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA TACTTTCTAT CATGCTGATC ACCTTGCTGG CTGCCTGTGA ACAGGCGCCG AAAGCTGACA AGGCGACCAT TACAGAGGCT CACCCGGTAA AAGAGGGTAA AGGAAGCCCA TACCTGGTTG ACACCGCTAA CAGCGAATTA CGCTGGATAG GCACCAAGCC TACCGGCAAA CATACCGGCC GGTTTACACT GCAGGAAGGA AAGTTATTGG TAAAAGACAC GGCCATCACC GGTGGTAACA TCATTATCCG TATGAACTCC CTGGAAAATA TCGACCTGTC CAAATCAGAT ACTTCTCTGA AACGTAAACT GGAAGATGAG TTAAAAGGCC CGCTGTTCTT CGATGTGGTA AATTTCCCGG TAGCTACGTT TGAGATCACC AATGTCAGCG ACTTTACGCC TTCTGTGGGT AATGAGGTAT TGATGAAGAA CGCAAATTAT ACGGTACAGG GTAATCTGAC GATCAAGAAT ATCACTAAGA ATATCTCCTT CCCTGCTATT ATCAGGTTTG AAAATGGCAC TATCACAGCA ATGGCCAATT TCAATATCGA CAGAACGCTG TGGGGAATGA CCTACAGAGC TGATAAATCC ATGCAGGACA AACTGATCAA CTCAGCGGTA AATCTTGAAT TCAGAATCAC TGCTGCCAAA TAA
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Protein sequence | MKYILSIMLI TLLAACEQAP KADKATITEA HPVKEGKGSP YLVDTANSEL RWIGTKPTGK HTGRFTLQEG KLLVKDTAIT GGNIIIRMNS LENIDLSKSD TSLKRKLEDE LKGPLFFDVV NFPVATFEIT NVSDFTPSVG NEVLMKNANY TVQGNLTIKN ITKNISFPAI IRFENGTITA MANFNIDRTL WGMTYRADKS MQDKLINSAV NLEFRITAAK
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