Gene Cpin_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1133 
Symbol 
ID8357249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1352191 
End bp1352577 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content45% 
IMG OID644963289 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003120832 
Protein GI256420179 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.354623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA GAAAAACCAA TTCATCTAAC TATCAGAACC AGTCTTACCT GGAGAACAAA 
TGTCCGCTGA ACGAGCTGCT GTTTACCATG AGCAGACGCT GGACTACAGA CGTCCTTTTT
TGCATAGAGG AAGGTAATAA CCGTTTTTCA GGTATCCGGG AAGAGCTGGC TTATATTACG
GATCATATTC TGTCTGACAG ACTGAAAACA TTGGAAAAAA CAGGACTGAT CACCCGTCAC
CAGTTTCCAG GTATGCCGCC TAAGGTAACT TATGCGTTAA CGGAGCATGG CGTGGAGTTA
TGTAACCTGC TATCCAAGTT GTGCGACTTC TCCAGCCTGA TATACGAAGA GAAAGAGGAG
AAAGAAGAGA AAGCTGTCAC CGCTTGA
 
Protein sequence
MAERKTNSSN YQNQSYLENK CPLNELLFTM SRRWTTDVLF CIEEGNNRFS GIREELAYIT 
DHILSDRLKT LEKTGLITRH QFPGMPPKVT YALTEHGVEL CNLLSKLCDF SSLIYEEKEE
KEEKAVTA