Gene Cpin_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1104 
Symbol 
ID8357218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1324572 
End bp1324979 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID644963258 
Producthypothetical protein 
Protein accessionYP_003120803 
Protein GI256420150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTA ACAAGCCGAT TGGCTGGTAT CTGAAAGAAG CAGACAAACG TATTACTGCT 
TTTCTAAACG ATGAATTCGC AGATCTTTCC ATTTCCCGTC ATCACTGGTT GATCATGCAG
CGGATAGCAG AACAGGAAAG TATTATTACC TGGGAGTTTT TCCAGGAAAT AAAGTCGACG
GTCAATGCAC AACAATTCGG CGAGATCATA CAGTCAATGC TAGATCGTGG TTGGGTCACG
GTTTCAGCAG AAGATAAATG CGCCTTCACT GCGGAAGGAA GGGGAGCGTA TCAGCAGATA
GGAAGCATAC AGCAGGAGCG GTCTGGCCGG ATGTTAAACG GTATCACCGA AGCGGAGTAT
AATCTGATGA TCAGCGTATT GAACAGAATA ATCGTGAATA TAGGGTAA
 
Protein sequence
MEANKPIGWY LKEADKRITA FLNDEFADLS ISRHHWLIMQ RIAEQESIIT WEFFQEIKST 
VNAQQFGEII QSMLDRGWVT VSAEDKCAFT AEGRGAYQQI GSIQQERSGR MLNGITEAEY
NLMISVLNRI IVNIG