| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1097 |
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| Symbol | |
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| ID | 8357211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1315207 |
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| End bp | 1318653 |
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| Gene Length | 3447 bp |
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| Protein Length | 1148 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963251 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003120796 |
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| Protein GI | 256420143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00128264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGAA ATTACTTTAG GTGTATAGGG GATCGTATTG CCCTGTTATT ACTGTTGCCA
GCCATGGGGT ATGCTGCTTC AGATAAAGTA CACTACCACC CGCAGCAGGA GTTGTATGCT
GCAACGGGAT TGAATCAGTC CAAGGGAAGA CAGACCTTAA AAGATATCCT TGTCTCATTG
GAAACAAAGT ATAAGGTACG TATTAACTAT GTAGGTCAGT CGATTGGCAG TATCCAGACA
GAGCCGCCTG CAGTCAAGGG TGCATCTGTG AAATTCATTC AGTACCTCAA TCAATTCCTG
AAACCACTCG GACTGGAAGC AGAGGAATCT GGCGCTAACA TGTTTATCGT CTACAAACAG
GAAGGTGCAG CACCTGCACC CAAGCCCGCA GCGCCTGTTG AAAAAAAAGC AACGCCGGAA
CAGGAAAAAC CAGCCGCTAT CAATATATCC GGTCTCGTAA CGGATGATAC AGGCGTTCCT
TTACCGGGCG TAACTGTTGT TGTGAAAGGT ACTTCAAACG GTGTGCATAC TTCTAATGAC
GGTAAATATG AACTGAAGAA TGTGCCCGAA AATGCGCACA TCGTATTCAG CTTCATTGGT
TTCAAAGCAC AGGAAATTGT GCTTAAAGGA CAACATAAAC TGGATGTACG TTTAAAGACA
GATGTACAGG CCGTAAAAGA TGTGGTTGTA ACCGGGTACT ATGAGATCAA GAAAGAGAGT
TTTACCGGTA TCGCAACGGT CCTTACTTCT GATGATATCA AAAAAGTAAA TCCGCAGAAC
GTACTGAGCA GCTTGCAGGC ATATGACCCT TCATTTAAAC TGGTTGAAAA CAATCTGCTG
GGCTCTAACC CCAACAGAAT TCCTAATATC AATGTTAGGG GTACGACCGC ATTGCCAAGT
GCAGACGTAT CCAAACTGAC GAGAAACAGT ATGCTGACCG GTGTTACCAA TCAGCCTACT
TTTATTCTCG ATGGTTATGA GGTGAATGTA CAGACTGTGT TTGACCTGGA TCCGAACAGG
ATCGCATCTA TGACCCTGCT GAAAGATGCA GCAGCAACAG CGATCTATGG TTCAAGAGCG
GCAAACGGTG TAGTAGTCAT TCGCACAAAG GCGCCAAAAG AAGGGAAGCT GGCTGTCAAC
TATGGTTATG AGATGACGTT GAATGCACCT GATCTTTCTG ATTACCATGT ACTGAATGCA
GGAGAGAAAC TGGAGTATGA ACGACTGGCA AAACTGTATG AATCAAATAA CGTAGATGCG
CCGATCGATC TGGAGAAGGA ATATTATCAG AAAAAGAAAA ACGTACTCGC CGGCGTAAAT
ACTTATTGGT TGTCTCAGCC ATTACAGGTA GATCTCGGAC ACAAACATTC CTTATATCTT
GAAGGTGGTA CACCTGTTGT GAAATATGGA TTGGATATGC GTTACCAATC CAATAACGGT
GTAATGAAAG GCTCTTACAG AAAACGTTAT GGTCTTGCAG CATCCCTGTC TTACAACGTG
CAGAACAAGA TACAGTTCAG AAATCAGATG TCTATCACAC AGGTAGATGG AAGAGAATCT
CCTTACAGAG AGTTTTCCAA CTACGTAAGA ATGAATCCTT ACTATCCAAA AACAGATTCA
ACAGGCAGAC TGTTACGTGA AGTAGACAAA TGGAGTTATC GCGGTGGCGC TAATGGTGGT
GCTGTTACAG ATCCAGTGCT GAATCCGATG TATGAAGCGA CTACGGGTAG TCTGGAGAAG
AATCAATACG TAGAATTCAT GGATGCATTT TCAGGGGAAT GGACCATTAA TCCTGCATTA
AGATTAAGAG GCCAGATATC CCTGACAAAG AGGAGATCTA CTGCAGATAA ATTTACCTCA
CCATTCAGTA ATGAATATTA TAACGTAAGT GGTAATGATC TGAAAGACCG TGGTAAATAC
ACGTTTGCTG ATGAAGATTT CTGGCAGGCA GATGGTAGTC TGACACTGAG TTATGCAAAA
CAGATCAGGT CTAACTTCCT GAACGTATCA CTGGGTACGA ATATTCAGGA CAGAAGTAAT
GACAGCAAGG CTTTTGCTGC ACAGGGTTTC TCTAATGACA GATTCTCACA GATTGAGTTT
GCCCGTACTT ATGAAAAAGA TGGCTCTCCA AGTGGTGAGT ACACACAGGA CCGTCTGATC
GGATCTTTTC TCTATGTAAA CTATTCCTAT AAAAATAAGT TCCTGATGGA CGGTACCGTA
CGTCTGGACG GATCCTCCAA ATTTGGTACT GATTCCCGTA TGGCTACCTT CTGGTCCTAT
GGTCTGGGAT GGAATGTACA CAACGAAAAA TTCATTCCAC GTAAGGTTAT TTCACAATTG
ACGCTGAGGG CTACAACAGG TCTGACGGGT GATGTATCCT TCCCGTCTTA TTTATCTAAT
ACCACTTACC AGTATTACAG CAACGACTGG TATTCCACAG GGGTAGGCGC GATTTTCAGA
ACGTATGGTA ACTCTTCTCT GAGATGGCAG CGTACCAAAA ACTATGATGC CGGTATGGAA
CTGGACCTTT TCAATGGTCG TTTCTATATT GCGCCGCGTT ATTACTATAA ACTCACCAAA
GACCTGCTTG CAGATATTAT CGTACCACCA TCAACAGGTT TTACGGACTA TAAAGCCAAC
CTGGGGGAAA TGGTGAATCG TGGTTTTGAG ATAAACGTCC GCAGTAACGT GCTGAGAGGT
AAGAACTGGT CTTTCAACCT GTTTGCCAAC CTTGTGACAA ACAAAAACAA GATCACCAAG
ATCTCCAATG CGCTGAAGAG CTACAATGAT AAAGTGGATG ATAAACAGGA GAGTGATCCT
AATCTGAATT CTGTTCCGCT ACTGCGTTTC CAGGAAGGAC AGTCCCTTAA TACGATCTAT
GCCGTAAGAT CAATGGGGAT AGATCCGGAA AATGGTAAAG AGATATTTGT GAAGAAAGAT
GGAACCTATA CACATACCTA CAGTGTGAAA GACATGGTGC CTGTCGGCGA TATGACCACC
AAACTGGAAG GTACATTCGG AGGCAGTCTG TATTATGGTA ACTGGGTCGC TGAAGTAAGA
TTCTATACAA AAGGCGGTGG CGATCTGTAT AATCAGACAC TGGTGGACCG TGTAGAAAAT
GCAGATCCAC GATACAATGT GGATAGTCGG GTGCTGCAAT CCAGGTGGAA ACAACCAGGA
GATCATGCAC TGTTTAAAGA TATTGCAGAC CAGGGTTCTA CCCGTACTTC TTCCCGTTTT
GTACAACGCG ATAACGTAGT GGAATTAAAG TCTGTTTATC TGGGATACAA TGTTCCGATG
TCGGTGGCCA AGCGCTACAG GATGAATAAC CTGCGGTGTT CACTGAATTT GAATGATGTG
TGGAGAACAT CCACTATAGA TGCAGAAAGA GGTATCGATT ATCCTTTTGC GAGAACATTC
ACCTTCTCAT TATCTACTCA GTTCTAA
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| Protein sequence | MPGNYFRCIG DRIALLLLLP AMGYAASDKV HYHPQQELYA ATGLNQSKGR QTLKDILVSL
ETKYKVRINY VGQSIGSIQT EPPAVKGASV KFIQYLNQFL KPLGLEAEES GANMFIVYKQ
EGAAPAPKPA APVEKKATPE QEKPAAINIS GLVTDDTGVP LPGVTVVVKG TSNGVHTSND
GKYELKNVPE NAHIVFSFIG FKAQEIVLKG QHKLDVRLKT DVQAVKDVVV TGYYEIKKES
FTGIATVLTS DDIKKVNPQN VLSSLQAYDP SFKLVENNLL GSNPNRIPNI NVRGTTALPS
ADVSKLTRNS MLTGVTNQPT FILDGYEVNV QTVFDLDPNR IASMTLLKDA AATAIYGSRA
ANGVVVIRTK APKEGKLAVN YGYEMTLNAP DLSDYHVLNA GEKLEYERLA KLYESNNVDA
PIDLEKEYYQ KKKNVLAGVN TYWLSQPLQV DLGHKHSLYL EGGTPVVKYG LDMRYQSNNG
VMKGSYRKRY GLAASLSYNV QNKIQFRNQM SITQVDGRES PYREFSNYVR MNPYYPKTDS
TGRLLREVDK WSYRGGANGG AVTDPVLNPM YEATTGSLEK NQYVEFMDAF SGEWTINPAL
RLRGQISLTK RRSTADKFTS PFSNEYYNVS GNDLKDRGKY TFADEDFWQA DGSLTLSYAK
QIRSNFLNVS LGTNIQDRSN DSKAFAAQGF SNDRFSQIEF ARTYEKDGSP SGEYTQDRLI
GSFLYVNYSY KNKFLMDGTV RLDGSSKFGT DSRMATFWSY GLGWNVHNEK FIPRKVISQL
TLRATTGLTG DVSFPSYLSN TTYQYYSNDW YSTGVGAIFR TYGNSSLRWQ RTKNYDAGME
LDLFNGRFYI APRYYYKLTK DLLADIIVPP STGFTDYKAN LGEMVNRGFE INVRSNVLRG
KNWSFNLFAN LVTNKNKITK ISNALKSYND KVDDKQESDP NLNSVPLLRF QEGQSLNTIY
AVRSMGIDPE NGKEIFVKKD GTYTHTYSVK DMVPVGDMTT KLEGTFGGSL YYGNWVAEVR
FYTKGGGDLY NQTLVDRVEN ADPRYNVDSR VLQSRWKQPG DHALFKDIAD QGSTRTSSRF
VQRDNVVELK SVYLGYNVPM SVAKRYRMNN LRCSLNLNDV WRTSTIDAER GIDYPFARTF
TFSLSTQF
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