| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1079 |
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| Symbol | |
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| ID | 8357193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1294162 |
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| End bp | 1295247 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963233 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003120778 |
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| Protein GI | 256420125 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAG ACAATACTTC CCACAACAAG CAGCAGGGAG AGATCTCCAT AAGAGAGATT
GTTTTAAAAC TGTTAGACTG GTGGAGATTT CTTTTAAGTA AATGGTTGAT CATTCTTCTT
GCGGGAATAT TAGGAGGAGG TGCAGGCGTG CTGATGTCTT TGGTTAAAAA GAAAAAATAT
ATAGGTCAGC TTACCTTCAT TCTGGAAGAC GCCAATAGTA ATCCATTAAG TGCATATATG
GGTATTGCCA GTCAGTTTGG TGTGGATCTG GGCGGTGGTG GCGGCTCAAG TGGTATTTTC
AGTGATGACA ATATCATGGA ATTTCTGCAA TCCCGCTTAA TGGTGGAAAA AGCATTATTA
TCCACTGTGA AGGTGGATAA CCGCGAAATA ACACTGGCTG AACTCTATGT TGAGGTGAAT
GAGATGCGAA AAGGCTGGCA GAAGATACCA GAGCTGGCTA ATCTCCATTT CCTGCCCACT
ACCCCGAGAG ATCAGTATTC CCTGAAGCAG GACAGTGTGC TGGGTACTAT ATACGAGCGT
ATTGTAAAAG CTGAATTGGA AGTTGAAAAA CCTAATCCGA AGGTGAGCTT TATATCGGTA
AAAGCTACTA CGTTGAATGA AACGTTCTCC AAAAAGTTTA CAGAAACACT GGTAAGAGAA
GCAATCGATT TTTATGTCGA TACAAAGACG AGAAGAAACA AGATAAGTGT AGACAGATTA
CAGGGACAGG CCGATTCACT GGAGATACTG CTGAACAGAA AGACCTATTC CGCAGCAGCT
GTACAACCCT TTAACACGAA CCCTGCAAGA CAGGTGGCGA CTGTAGGGGG CGAGCTGGCT
CTGAGAGATA AGCTGATCCT GCAGACGATG TACGGAGAAG TAATTAAGAA CCTGGAACTG
AGCAAAATTG CGATGGCCCA GGATATGCCA GTGATCCAGA TCGTAGATAA GCCGATTCTG
CCGTTAAAAA CAGAGCGTTT GGGAAAAGTG AAGGCCGCTA TCATAGGCGC TTTCCTCTTT
GGATTCCTGA CTGTTATTTT GCTGATTGGC AGAAGAATTT TCCGCCAGAT CCTTGCCGAG
AAATAA
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| Protein sequence | MHPDNTSHNK QQGEISIREI VLKLLDWWRF LLSKWLIILL AGILGGGAGV LMSLVKKKKY
IGQLTFILED ANSNPLSAYM GIASQFGVDL GGGGGSSGIF SDDNIMEFLQ SRLMVEKALL
STVKVDNREI TLAELYVEVN EMRKGWQKIP ELANLHFLPT TPRDQYSLKQ DSVLGTIYER
IVKAELEVEK PNPKVSFISV KATTLNETFS KKFTETLVRE AIDFYVDTKT RRNKISVDRL
QGQADSLEIL LNRKTYSAAA VQPFNTNPAR QVATVGGELA LRDKLILQTM YGEVIKNLEL
SKIAMAQDMP VIQIVDKPIL PLKTERLGKV KAAIIGAFLF GFLTVILLIG RRIFRQILAE
K
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