Gene Cpin_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1061 
Symbol 
ID8357175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1268939 
End bp1269544 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID644963215 
ProductSuperoxide dismutase 
Protein accessionYP_003120760 
Protein GI256420107 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTA CACTTCCGAG CTTACCGTAC GCACACGACG CACTGGAACC ACATATTGAT 
AAACTGACAA TGGAAATTCA CCACGGTAAG CACCATCAGG CATATGTAGA CAACCTGAAC
AAAGCGATTG CCGGTACTGA AAATGAAAAT AAATCCCTGG AAGAGCTGGT AGCAAGCGCT
GGTAAAATCA GCCCTGCTGT AAGAAACAAC GGTGGTGGTC ACTGGAACCA CAGCTTCTTC
TGGAAAGTAA TCGGCCCTAA TGCAGGTGGT GAACCTACAG GCGCGCTGGC AGATGCTATT
AAGAGCACTT TCGGTTCTTT TGAAGAATTC AAAGAGAAAT TTGCTAACGC CGGTGCTACC
CGTTTTGGTT CCGGTTGGGC ATGGTTGATC GTAAAAGACG GTAAACTGGA AATCACTTCC
ACGCCAAACC AGGACAATCC ACTGATGGAT GTTGCTGAAG TAAAAGGTAC GCCAGTATTG
GGTATCGACG TTTGGGAACA CGCTTACTAC CTGAAATATC AGAACCGTCG TCCGGAATAC
CTGAAAGCTT TCTGGAGCGT GGTTAACTGG AGCGAAGTAG CTAAGAACTA CGAAGCTGCT
AAATAA
 
Protein sequence
MAFTLPSLPY AHDALEPHID KLTMEIHHGK HHQAYVDNLN KAIAGTENEN KSLEELVASA 
GKISPAVRNN GGGHWNHSFF WKVIGPNAGG EPTGALADAI KSTFGSFEEF KEKFANAGAT
RFGSGWAWLI VKDGKLEITS TPNQDNPLMD VAEVKGTPVL GIDVWEHAYY LKYQNRRPEY
LKAFWSVVNW SEVAKNYEAA K