Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1058 |
Symbol | |
ID | 8357172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1264861 |
End bp | 1266528 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963212 |
Product | carboxyl-terminal protease |
Protein accession | YP_003120757 |
Protein GI | 256420104 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAT TTTTTCGCAG AAATAGAAGA ATGATGCTGG TATTGGTGCT GCTGGTGGCC GGCGGTATGA GTATCATGGC TTATAATGAG AAGGATAAGT ACTTCGAAAT AGCCAAGAAT CTTGACATAT TCGCCGCCTT TTACCGCGAA CTCAATACCT ACTACGTAGA TGAATTGCCT CCCGAAAAAC TCATGCATAA AGGCATTGAC GCCATGCTGG AAGAGACAGA CCCTTACACT GATTTCATAC CGGAAGAAAA CCTGGATGAA CTAAAGTTTA TGGCCACCGG TAAATACGGT GGAGTAGGGG TGTCCGTCAA TACCGACAGC GAACGCACCG TTATCACCGA CGTATACGAA GGCGGTCCGA TGGATAAAGC CGGTGTGAAA CCTGGCGATA TCATTCTCTC ACTTGATGGG AAGGATATCA AAGGACTGGA CCAGGAGGAG ATCAGCCGTA TGCTGAAAGG TGCTCCGGGC TCTTCCCTGG ATATGATCAC CAAACATCCT GTTACCGGTG CACAGAACAC CAGGAAGATT AATCGGGAAG AAATCAATGT GAAAGCTGTC AGCTTCTCCG GTATCACCAA CCGCGATATC GGGTATATCA GGATGACACA GTTCACCGAA AACAGCGGGG AACTGGTACA AGGGGCTTTC GCAGAACTTA AAAAGCAATA TCCTTCCATG AAAGGGCTGA TACTGGACCT CAGAGGTAAC CCGGGTGGTT TACTCGATGA AGCAGTGGTA GTGGCCAATA TCTTCGTGGA TAAGAATAAA ACGATTGTTA GCACCAAAGG AAAAGTAAAG AGCTGGGACA GGGAATATAA AACCGAAACA TCCGCATTCG ATGCACATAT CCCCCTGGTC GTACTGACCA ACCGCTCCTC GGCTTCCGCT TCAGAAATCG TGGCAGGCGC TATTCAGGAC CTCGATAGGG GCGTAATTAT CGGTCAGCGT TCCTTTGGTA AGGGATTAGT GCAAACCACG CGTCCGCTGC CTTATAATGC GAAACTGAAA GTGACCACCG CGAAATACTA CACACCAAGC GGTCGCTGTA TCCAGGCCAT TGACTATTCC CACAGAAACA GCGATGGTGA GGTGGAATAT GTAGCCGATT CTGTGCGTAA ATCCTTTAAT ACTGTAGCTG GCCGTAAAGT AAGAGATGGC GGTGGCATAG AACCAGATGA TGCAGTAGAA CCAACCCTGC TCAGCCAGGT AGCTATCACC CTGTTGCGTA AACAATACAT CTTTGATTTC GCTACCCAGT ATTACTACAG TCATCCGAAA ATTGCAGCTG CCAATACCTT CGAACTTAGT GAAGACGATT TCTCCGATTT CCTGAAATAT CTCGATGGCA GAAACTACAG CTACAAAACC CGTAGTGAAG AAGCCCTGGA ATCATTCCAG GCTACCGCCA GAAAAGAGAA ATACTATGAG GCAGTAGCAA AAGAGTTTGA AGCGCTGCAG GTCAAAATGA AACATGATAA GAAACAGGAC CTGCTGAAGA ATAAAACAGA AATCAAACGG TTACTGGAAG AAGAGATCGC CAGCCGTTAC TATATGCAGC GTGGTCGTAT TGAAAAATCA CTTTCCAGTG ATAATGAAGT CAATGAGGCG ATTGCCGTAC TGCATTCACC GGAACGTTAT CAGCAGTTAC TGAAATAA
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Protein sequence | MRAFFRRNRR MMLVLVLLVA GGMSIMAYNE KDKYFEIAKN LDIFAAFYRE LNTYYVDELP PEKLMHKGID AMLEETDPYT DFIPEENLDE LKFMATGKYG GVGVSVNTDS ERTVITDVYE GGPMDKAGVK PGDIILSLDG KDIKGLDQEE ISRMLKGAPG SSLDMITKHP VTGAQNTRKI NREEINVKAV SFSGITNRDI GYIRMTQFTE NSGELVQGAF AELKKQYPSM KGLILDLRGN PGGLLDEAVV VANIFVDKNK TIVSTKGKVK SWDREYKTET SAFDAHIPLV VLTNRSSASA SEIVAGAIQD LDRGVIIGQR SFGKGLVQTT RPLPYNAKLK VTTAKYYTPS GRCIQAIDYS HRNSDGEVEY VADSVRKSFN TVAGRKVRDG GGIEPDDAVE PTLLSQVAIT LLRKQYIFDF ATQYYYSHPK IAAANTFELS EDDFSDFLKY LDGRNYSYKT RSEEALESFQ ATARKEKYYE AVAKEFEALQ VKMKHDKKQD LLKNKTEIKR LLEEEIASRY YMQRGRIEKS LSSDNEVNEA IAVLHSPERY QQLLK
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