Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1047 |
Symbol | |
ID | 8357161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1254547 |
End bp | 1255314 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963201 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003120746 |
Protein GI | 256420093 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTACG AAATAAAAAC ACAGGGAAAG TTTAAATTCA TTGAAGAAGG GGAGGGGGAG CCTTTGGTGT TATTGCACGG TTTATTCGGA GCAATGAGCA ACTTTGGCGG TCTGATTGAT TACTTCCGGC ACTACAATAA AGTAGTAGTA CCGATTTTGC CTCTGTTTGA TCTGAATATT CTGGACACTT CCGTATCAGG ACTCGCGAAG TATGTACACA AGTTCATAGA AACCATGGGG TACACCAATG TACACCTGCT TGGTAACTCC CTGGGCGGTC ACGTAGGACT GGTATACCTC CTGAAACATC CGGAAGCGCA TACAAAATCA TTGACACTGA CCGGTAGCTC CGGACTGTTT GAAAATGGTA TGGGTGAAAC TTATCCTAAA CGTGGCGACT ACGAATATAT CCGTAAGAAA ACGGAACTGA CATTCTATGA TCCGGCAATG GCTACCAAAG AGCTGGTGGA TGAAGTATTC GACATTACTA CCAACCGTCT GAAGGTGATC AAGATCATTA CCCTGGCAAA ATCCGCAATC CGTCATAACC TGGGCGAAGA ACTGCGTGAT ATCAAAATAC CTACACTGCT GGTATGGGGA CTGAACGATA CCGTAACACC TCCGATGGTG GGCGAGGAGT TCAAAAAACT CATTCCTAAC TCAGAACTGC ACTTCATTGA TAAATGCGGC CACGCCCCGA TGATGGAGCG TCCGGACGAA TTCAACAAGA TCCTGCATCC GTTTCTGGAG AAGTTGAAAA ACCAGTAA
|
Protein sequence | MVYEIKTQGK FKFIEEGEGE PLVLLHGLFG AMSNFGGLID YFRHYNKVVV PILPLFDLNI LDTSVSGLAK YVHKFIETMG YTNVHLLGNS LGGHVGLVYL LKHPEAHTKS LTLTGSSGLF ENGMGETYPK RGDYEYIRKK TELTFYDPAM ATKELVDEVF DITTNRLKVI KIITLAKSAI RHNLGEELRD IKIPTLLVWG LNDTVTPPMV GEEFKKLIPN SELHFIDKCG HAPMMERPDE FNKILHPFLE KLKNQ
|
| |