Gene Cpin_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1047 
Symbol 
ID8357161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1254547 
End bp1255314 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID644963201 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003120746 
Protein GI256420093 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTACG AAATAAAAAC ACAGGGAAAG TTTAAATTCA TTGAAGAAGG GGAGGGGGAG 
CCTTTGGTGT TATTGCACGG TTTATTCGGA GCAATGAGCA ACTTTGGCGG TCTGATTGAT
TACTTCCGGC ACTACAATAA AGTAGTAGTA CCGATTTTGC CTCTGTTTGA TCTGAATATT
CTGGACACTT CCGTATCAGG ACTCGCGAAG TATGTACACA AGTTCATAGA AACCATGGGG
TACACCAATG TACACCTGCT TGGTAACTCC CTGGGCGGTC ACGTAGGACT GGTATACCTC
CTGAAACATC CGGAAGCGCA TACAAAATCA TTGACACTGA CCGGTAGCTC CGGACTGTTT
GAAAATGGTA TGGGTGAAAC TTATCCTAAA CGTGGCGACT ACGAATATAT CCGTAAGAAA
ACGGAACTGA CATTCTATGA TCCGGCAATG GCTACCAAAG AGCTGGTGGA TGAAGTATTC
GACATTACTA CCAACCGTCT GAAGGTGATC AAGATCATTA CCCTGGCAAA ATCCGCAATC
CGTCATAACC TGGGCGAAGA ACTGCGTGAT ATCAAAATAC CTACACTGCT GGTATGGGGA
CTGAACGATA CCGTAACACC TCCGATGGTG GGCGAGGAGT TCAAAAAACT CATTCCTAAC
TCAGAACTGC ACTTCATTGA TAAATGCGGC CACGCCCCGA TGATGGAGCG TCCGGACGAA
TTCAACAAGA TCCTGCATCC GTTTCTGGAG AAGTTGAAAA ACCAGTAA
 
Protein sequence
MVYEIKTQGK FKFIEEGEGE PLVLLHGLFG AMSNFGGLID YFRHYNKVVV PILPLFDLNI 
LDTSVSGLAK YVHKFIETMG YTNVHLLGNS LGGHVGLVYL LKHPEAHTKS LTLTGSSGLF
ENGMGETYPK RGDYEYIRKK TELTFYDPAM ATKELVDEVF DITTNRLKVI KIITLAKSAI
RHNLGEELRD IKIPTLLVWG LNDTVTPPMV GEEFKKLIPN SELHFIDKCG HAPMMERPDE
FNKILHPFLE KLKNQ