Gene Cpin_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1043 
Symbol 
ID8357157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1251876 
End bp1252970 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID644963197 
Productglycosyl transferase group 1 
Protein accessionYP_003120742 
Protein GI256420089 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG GAGTGAATGC TTCCTGTGTA CTGCGGGATA CGCCAGCTGA CACAGGTAAT 
ATAGTCAGGG ATTTATTGTT GGGACTATGT AACCATCATC CGGAACACCA GTTCATCCTC
TTCTTTGATC AGGCCCCATC AGGCGTCATA CAATGGCCGG GCAATGTGAC GACTGTAGTG
ATACCACTCA GTGGTACACA GGCATGGCGT CGTTATCTGT GGTTGGAATG GAAGCTGGTC
AGTGCCATGA AAAAACAGCA ACTGGATCTG TTCCTGGGGT TGGATGGACA ATTCCCGTTA
AGGAGCCAAG TACCGGCTCA GCTGTTGATC AGTGATATGG GCTTTTTACA TGGCGCGGTA
GGTATACCGT CGGCAGCACA GCGGTTTTTG CAGAAAAACC TGATTAAATA TATCAGGCAG
GCTAAAAAAG TGATCGTACT GTCTACTACG CTGGAAAAGG ACGTATTACA GTATGCGCCT
GAAGCCGCTG CGAAGCTAAA AGTGCTGAAA CCTGCGGTAG ATGCAAGTTA TCATCCGCTG
GAATGGGAAG CCCGGGAGGA AGTAAAAGAA ACGTATGCCG GTCGCGTGGA ATACTTTGCC
GTAGTAGGCA GGGTACATCC GAGAAATAAC CTTTTACCGC TGTTAAAAGC CTTTTCAGCA
TTGAAGCGTC GCCTGCATTC CAATATGAAA TTATTGTTAA TAGGGGATCA TACAAGTGCT
GGAAGAGAGA TTATAGAATC ACTGACTTCC TACAAATACA GGAATGATGT GATACTGCTG
CCTGAGGTTG ATCAGGCGGA ACTGGCAAAA CTGGTAGCAG GCGCTTATGC CCTGGTTTAT
CCGCCCCGTT TTGAGGGGGT GGCCATGCCG GTATATGCGG CCATGCAGAG TGAGGTACCG
GTGATTGCAT TAGATGGCGC TGCTGCCAGA GAAGCAGGCG GAGACGCTGT ATTGTTTGCT
GATCCGGAAA GTCTGGAAGA TCTGGCAGAT AAGATGTGCC TGCTTTATAA GGACGAACAA
TTACGCAGCC GTTTACTGGG AAATATTAAA AAAGCGGACT GGGCTACGGT CTTGGACGTG
CTGATAACAG ATTAG
 
Protein sequence
MRIGVNASCV LRDTPADTGN IVRDLLLGLC NHHPEHQFIL FFDQAPSGVI QWPGNVTTVV 
IPLSGTQAWR RYLWLEWKLV SAMKKQQLDL FLGLDGQFPL RSQVPAQLLI SDMGFLHGAV
GIPSAAQRFL QKNLIKYIRQ AKKVIVLSTT LEKDVLQYAP EAAAKLKVLK PAVDASYHPL
EWEAREEVKE TYAGRVEYFA VVGRVHPRNN LLPLLKAFSA LKRRLHSNMK LLLIGDHTSA
GREIIESLTS YKYRNDVILL PEVDQAELAK LVAGAYALVY PPRFEGVAMP VYAAMQSEVP
VIALDGAAAR EAGGDAVLFA DPESLEDLAD KMCLLYKDEQ LRSRLLGNIK KADWATVLDV
LITD