| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1031 |
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| Symbol | |
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| ID | 8357145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1235914 |
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| End bp | 1236948 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963185 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_003120730 |
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| Protein GI | 256420077 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.290846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACAG CTACTATAGC TCCGCAGACG TTAACGGCGA AGGATTTTGC AACGGACCAG
GAAGTACGCT GGTGCCCAGG TTGTGGAGAC TACTCGATAT TAAAACAAGT ACAGACTATT
ATGCCCGGTC TGGGCATTCC TAAGGAGAAT ATTGTGATTG TATCCGGTAT CGGTTGCTCC
TCACGTTTCC CTTATTATAT GAACACTTAC GGCATGCACT CCATCCATGG TCGTGCTACT
GCTATCGCTT CCGGTCTGAA AGCTGTACGC CCTGAACTGA GCGTTTGGGT GGTAACCGGT
GATGGCGACG GTCTCTCTAT CGGGGGTAAC CATACCATTC ACTTACTGCG CCGTAACTTC
GATATCAATG TGATGCTGTT CAATAACCAG ATCTATGGTT TGACGAAAGG CCAGTACTCT
CCTACTTCAG AAGAGAACAA AGTGACCAAG TCCACTCCTT TCGGCAGTAT CGATCACCCG
TTCAATCCGC TGGCACTGGC ACTGGGAGCA GATGCTACCT TCATTGCCCG TAGTATGGAC
CGTGATCCGA AACACCTGCA GGAAATGTTG AAACGCAGCC ATGCACATAA AGGCGCTTCC
TTCCTGGAGA TCTACCAGAA CTGTAACATC TTTAACGATG GTGCATTTGA AATCTTTACT
GAAAAAGGCA GCAAACTGGA AGAAACCCTG ATGGCAGAGC AAGGTCAGCC GCTGATCTTT
GGTGCACAGA AGAATAAAGG TATCCGCCTG GACGGTTTAA AACCTGTTGT GGTGGAACTG
GGTGGCGAAT ACAGCGCTGA TGACCTCTGG ATCCATGACG AAAAAGATTT CTATAAAGCA
CAGATTCTCA CCCGCATGTT CGACGATGCT CGTATCGAAG GCCACCTGCC ACGTCCTTTC
GGCGTGTTCT ACCAGGCTTT CCGTCCTACT TACGAAGAGC AGCTGAACTT CCAGACAGAA
GACGCACTGG CTAAAAAAGG CCCTGGCGAT CTGGATAAAT TACTGGCAGG TAAAGAAACC
TGGACTATCA GATAG
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| Protein sequence | MSTATIAPQT LTAKDFATDQ EVRWCPGCGD YSILKQVQTI MPGLGIPKEN IVIVSGIGCS
SRFPYYMNTY GMHSIHGRAT AIASGLKAVR PELSVWVVTG DGDGLSIGGN HTIHLLRRNF
DINVMLFNNQ IYGLTKGQYS PTSEENKVTK STPFGSIDHP FNPLALALGA DATFIARSMD
RDPKHLQEML KRSHAHKGAS FLEIYQNCNI FNDGAFEIFT EKGSKLEETL MAEQGQPLIF
GAQKNKGIRL DGLKPVVVEL GGEYSADDLW IHDEKDFYKA QILTRMFDDA RIEGHLPRPF
GVFYQAFRPT YEEQLNFQTE DALAKKGPGD LDKLLAGKET WTIR
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