Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1019 |
Symbol | |
ID | 8357133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1222333 |
End bp | 1222794 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644963173 |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_003120718 |
Protein GI | 256420065 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCAC AACCACTATT TAATCTTACG CTGCCGGTAG CTATTGGCGC TGATCATGCG GGATTTGAAT ATAAGGAAGA GATTATTTCT TACCTGGAGG GAAAAGGGCT GAAGGTAAAG GACGCAGGTG CTCATTCAAA AGACCCGGCT GATTATCCTG ATTTTGCGCA TCCGGTAGCT ACGCTGGTAG AGCGGGAGCA GGCTGCGTTT GGTATACTGG TATGTGGTAG TGGTAATGGC GTGGCTATTA CGGCTAACAA ACACCAGGGT ATACGTGCTG CTATCTGCTG GGGAGAAGAG TTGTCGCGCC TGGCACGTTC TCACAATAAC GCCAATGTAC TGTGCATCCC TGCGCGGTTT GTAGATGATG CCGTTGCCAA GCAGATCGTA GATGTATTCA TTGACACGCC ATTTGAAGGC GGCCGTCATG AAAACAGGGT CAGAAAGATC GCCTGTTTAT AG
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Protein sequence | MASQPLFNLT LPVAIGADHA GFEYKEEIIS YLEGKGLKVK DAGAHSKDPA DYPDFAHPVA TLVEREQAAF GILVCGSGNG VAITANKHQG IRAAICWGEE LSRLARSHNN ANVLCIPARF VDDAVAKQIV DVFIDTPFEG GRHENRVRKI ACL
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