Gene Cpin_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1019 
Symbol 
ID8357133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1222333 
End bp1222794 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID644963173 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003120718 
Protein GI256420065 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAC AACCACTATT TAATCTTACG CTGCCGGTAG CTATTGGCGC TGATCATGCG 
GGATTTGAAT ATAAGGAAGA GATTATTTCT TACCTGGAGG GAAAAGGGCT GAAGGTAAAG
GACGCAGGTG CTCATTCAAA AGACCCGGCT GATTATCCTG ATTTTGCGCA TCCGGTAGCT
ACGCTGGTAG AGCGGGAGCA GGCTGCGTTT GGTATACTGG TATGTGGTAG TGGTAATGGC
GTGGCTATTA CGGCTAACAA ACACCAGGGT ATACGTGCTG CTATCTGCTG GGGAGAAGAG
TTGTCGCGCC TGGCACGTTC TCACAATAAC GCCAATGTAC TGTGCATCCC TGCGCGGTTT
GTAGATGATG CCGTTGCCAA GCAGATCGTA GATGTATTCA TTGACACGCC ATTTGAAGGC
GGCCGTCATG AAAACAGGGT CAGAAAGATC GCCTGTTTAT AG
 
Protein sequence
MASQPLFNLT LPVAIGADHA GFEYKEEIIS YLEGKGLKVK DAGAHSKDPA DYPDFAHPVA 
TLVEREQAAF GILVCGSGNG VAITANKHQG IRAAICWGEE LSRLARSHNN ANVLCIPARF
VDDAVAKQIV DVFIDTPFEG GRHENRVRKI ACL