| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1015 |
|---|
| Symbol | |
|---|
| ID | 8357129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1217259 |
|---|
| End bp | 1218572 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644963169 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_003120714 |
|---|
| Protein GI | 256420061 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAGTG CTTTCGAAGT AAGAGGCGGC AACCGTCTTA AAGGGGAAAT TGTGCCCCAG
GGTGCCAAGA ACGAAGCTTT ACAGATTATC AGCGCTGTCC TGTTGACAGC TGATAAAGTT
ACTATCAGTA ATATCCCGGA TATCCTCGAT GTAAATCTGC TTATAGAGCT GCTCGGGGAT
ATGGGTGTGA AGACCAACAG AATCAGCCGT GATACCTGTG AGTTTCAGGC TGACCAGATC
AATCTTCCTT ATCTGGAGAG TGCAGAATTC AAAAAAAAAT CCGGACGTCT CAGAGGTTCT
GTTATGATAG CAGGTCCTTT GCTGGCACGC TTTGGTAAGG CGTATATTCC TAAACCGGGC
GGTGACAAGA TTGGTCGTCG CAGGCTGGAT ACGCATATCA TCGGTTTTGA GAAACTGGGT
GTGCAGTTCG TATATGATAA TGACGATAAC TATTTCCGTC TGGAAGCGGG AGACGGTGGT
CTGAAAGGCG CTTACATGCT GCTGGATGAA CCATCTGTGA CCGGCACTGC CAATATCGTG
ATGGCGGCAG TAATGGCCAA CGGAACAACG ACGATCTATA ACGCGGCATG TGAACCTTAC
CTGCAGCAGT TGTGCAAAAT GCTGAACAGC ATGGGTGCCA ACATCAACGG TATCGGATCC
AACCTGCTGA CCATTCAGGG TGTTTCTTCC CTGAAAGGTT GCAGTCATGC GATGCTGCCG
GATATGATCG AGATAGGTTC CTTCATCGGA CTGGCGGCAA TGACGCAGTC TGAGATCACT
ATCAAGAATG CCGGTGTACA GCATCTGGGT ATTATCCCGG AAAAGTTCCG TCAGTTAGGT
ATCAACCTGG AGATCAGGGA TAATGATATC TATATTCCTG CGCAGGATAG TTATGAAATC
CAGACTTTCC TGGATGGTTC CATCCTGACG ATCTCGGATC ATCCATGGCC AGGATTTACG
CCTGACCTGC TGAGCATTGT GCTGGTAGTA GCCACACAGG CGAAAGGTAG CGTGATGATA
CATCAGAAGA TGTTTGAGAG CAGATTGTTC TTTGTAGACA AACTGATCGA CATGGGCGCA
CAGATCGTAT TGTGTGATCC GCACCGTGCA GTAGTGATTG GTCTGGGCAG ACAACATGCG
CTGAGAGGCA TTACCATGTC ATCTCCGGAT ATACGTGCGG GTGTTTCCCT GCTGATCGCG
GCATTAAGCG CGGAAGGCAA GAGTACTATT CAGAACATCG AACAGATCGA TCGCGGTTAT
CAGTACATCG ACGAGCGATT GAGAAAACTC GGTGCAGACA TCAAGAGAAT TTAA
|
|---|
| Protein sequence | MSSAFEVRGG NRLKGEIVPQ GAKNEALQII SAVLLTADKV TISNIPDILD VNLLIELLGD
MGVKTNRISR DTCEFQADQI NLPYLESAEF KKKSGRLRGS VMIAGPLLAR FGKAYIPKPG
GDKIGRRRLD THIIGFEKLG VQFVYDNDDN YFRLEAGDGG LKGAYMLLDE PSVTGTANIV
MAAVMANGTT TIYNAACEPY LQQLCKMLNS MGANINGIGS NLLTIQGVSS LKGCSHAMLP
DMIEIGSFIG LAAMTQSEIT IKNAGVQHLG IIPEKFRQLG INLEIRDNDI YIPAQDSYEI
QTFLDGSILT ISDHPWPGFT PDLLSIVLVV ATQAKGSVMI HQKMFESRLF FVDKLIDMGA
QIVLCDPHRA VVIGLGRQHA LRGITMSSPD IRAGVSLLIA ALSAEGKSTI QNIEQIDRGY
QYIDERLRKL GADIKRI
|
|---|
| |