Gene Cpin_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1013 
Symbol 
ID8357127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1215231 
End bp1216157 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID644963167 
ProductTryptophan 2 3-dioxygenase (vermilion)-like protein 
Protein accessionYP_003120712 
Protein GI256420059 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3483] Tryptophan 2,3-dioxygenase (vermilion) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACAA CTGAAATCGC TGACAAAATC AAGCGGCTGG AAGAGAAGTA TGCCGCAATG 
GGCCAGGATC TTTCATCTTA TCTTGACGGG CTCCTTTATG CCGACTACCT TACCTATTGG
GATTACATCC AACTGGATGT ATTATTAAAT CTGCAGCATC CCCGGACCCC GATACCGGAT
GAGAACATTT TTATTATCTA TCACCAGATC ACGGAGCTTT ATTTCAAACT GACCTTACAG
GCTATCGAGC AGGTATGTCA GGCGCCGGAA CTGACAGCGG ATCTGTTTAA AACGCAGCTG
AAGCGTATCA ATAACTATTT CCGGAACCTG ATCAATTCCT TTGAGATCAT GGTGGATGGT
ATGGATAAGC AGCAATTCCT GCAGTTCAGG ATGGCTTTGT TACCGGCCAG CGGATTTCAG
AGTGGCCAGT TCCGTAAGAT AGAGATCTGC TCTACCGGAC TGGTAAACCT GGTATATGAG
CAGCAGCGGG AAGGCCTGAA AGGGAAGGAG TTGTCAGAAA TACTGGATAA TATCTACTGG
CGTAGCGGCG CTACCGAACT GGCTACGGGC AAGAAAACGC TGACCCTTCG CCAGTTTGAG
CAGAAGTATA TGCGCGATTT CCTGTTCGTG GCAGAGCGTT ATCAGCAAAA CAATATGCAG
TTGCGCTACA AACAGCTGCC AAAGGAAGTA CAGGAAGAGG TGATGCCCCT GCTAAAGGAG
TACGACCTGA ACATTAATGT GAGATGGCCG CTGATGCACT ATAAATCCGC CGTACGTTAT
CTGAACCGTA AACCGGAGGA TATCGCGGCT ACCGGAGGCA CCAACTGGCA GCAATATCTG
CCTCCGCGTC ATAAGCGTAT CGTATTCTTC CCCGAGATCT GGACGGAAGA AGAGCTGGAA
AACTGGGGAA AACTAGCATT TGAATAA
 
Protein sequence
MVTTEIADKI KRLEEKYAAM GQDLSSYLDG LLYADYLTYW DYIQLDVLLN LQHPRTPIPD 
ENIFIIYHQI TELYFKLTLQ AIEQVCQAPE LTADLFKTQL KRINNYFRNL INSFEIMVDG
MDKQQFLQFR MALLPASGFQ SGQFRKIEIC STGLVNLVYE QQREGLKGKE LSEILDNIYW
RSGATELATG KKTLTLRQFE QKYMRDFLFV AERYQQNNMQ LRYKQLPKEV QEEVMPLLKE
YDLNINVRWP LMHYKSAVRY LNRKPEDIAA TGGTNWQQYL PPRHKRIVFF PEIWTEEELE
NWGKLAFE