Gene Cpin_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1011 
Symbol 
ID8357125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1213483 
End bp1214190 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID644963165 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_003120710 
Protein GI256420057 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAA AGAAACTACA ACGCTTCGCA GAAATTGAGA CCTTTCCGAA TGTTTTAATA 
TACCCGGAAG GAATGCCCGG CAACTGGCAT ACATTCTTTA AAAACGATCA TCCGCTTACG
CTGGAACTCG CCTGTGGTAA AGGCGATTAT ACATTGGGCC TCGCCCGTCG CTACCCGGAA
AAAAACTTCC TGGGCGTAGA CCTCAAAGGA AACCGCATCT GGCGTGGCGC TAAAACCGCT
ATGGAAGAAC CCCTGCCCAA CGCCGGCTTC CTCCGCACAC AGATCGATAA ACTGGCCAAC
TATTTCGCAC CTGGAGAAAT TGCAGAAATA TGGATCACCT TCCCGGACCC ATTCCTCCGC
AACTCCAAAC AGAAAAAGCG GCTGACACAC CCAAAATTCC TTCAGCTGTA CCAGCCGCTG
CTGGCAAAAG ACGGAACAAT TAATCTTAAA ACAGACTCTC CTGAATTATA TATCTTCACA
AAAGAAGTGA TTGAAGCCGC AGGCTGTATC TTAATAGAAG ATATTCCGGA CATCTATGCC
ATGACCGAAG TACCTCCCCT GCTGCAAATC CGTACTTATT ATGAAGGAAT GCACCTGGAA
GACGGCCGCA CCATCAGGTA CCTGAAATTC AGACTACCCG AAGCCCCGCT CGACTGGCGT
GAGATAAAAC TGCCTTCTCA TGCAGAAGCC ACTGAAGGAG ACGATTGA
 
Protein sequence
MGQKKLQRFA EIETFPNVLI YPEGMPGNWH TFFKNDHPLT LELACGKGDY TLGLARRYPE 
KNFLGVDLKG NRIWRGAKTA MEEPLPNAGF LRTQIDKLAN YFAPGEIAEI WITFPDPFLR
NSKQKKRLTH PKFLQLYQPL LAKDGTINLK TDSPELYIFT KEVIEAAGCI LIEDIPDIYA
MTEVPPLLQI RTYYEGMHLE DGRTIRYLKF RLPEAPLDWR EIKLPSHAEA TEGDD