Gene Cpin_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0990 
Symbol 
ID8357104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1191715 
End bp1192170 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content42% 
IMG OID644963144 
Productresponse regulator receiver protein 
Protein accessionYP_003120689 
Protein GI256420036 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TTAAAACTGC CGGAAAAATT AGCATCCTTA TTGCTGATGA TGATGCTGAT 
GACAGAGAGC TGATCCAGGC AGCTTTTGAT GAAAACAGTA CACAGCACCA CATAAGTTTT
GTGGAAAACG GCGAGGACCT CCTGCATTAT CTAAAGCGGG ATGGTCACTA TGCGGATGAA
ACGCTACACC CTTTTCCACA GATTATCCTG CTGGACCTGA ATATGCCTAA AAAGGACGGA
AGGGAGGCAT TACGCGAACT GAAGGCAAAC AACGTTTTTA AGAGTATCCC TGTTATCATT
TTGACTACTT CCATGGAAGA AAAAGATATT ATTAACAGTT ATGAGCTGGG TGTAAACAGC
TTTATTATAA AACCGGTCAC CTATTCGGGC CTCGTGGAAT TTACCCGCGT GTTAGGACAA
TATTGGTTCG AAATAGCAGA ACTGCCAAAT GTTTAG
 
Protein sequence
MNKIKTAGKI SILIADDDAD DRELIQAAFD ENSTQHHISF VENGEDLLHY LKRDGHYADE 
TLHPFPQIIL LDLNMPKKDG REALRELKAN NVFKSIPVII LTTSMEEKDI INSYELGVNS
FIIKPVTYSG LVEFTRVLGQ YWFEIAELPN V