Gene Cpin_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0982 
Symbol 
ID8357096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1182230 
End bp1184338 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content36% 
IMG OID644963136 
Productserine/threonine protein kinase 
Protein accessionYP_003120681 
Protein GI256420028 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGC TTACCGAAAT TATAGTCGAC GATCCCAGTC TCCTGGAGAA AAAGAAATCC 
GAAAAAAAGA GCGGCAATAG AATTGGCTAC TATTATATCA TTATAAAGAG CTTAAAAGAA
AGTCTGAAAA ATGATGTAGT AAAATGTTTC TATATCAAAG GGATTACAAA TTTTGGTCTT
TGTGTAATAA AGGAAGGAAC TTATGGAGAT TCGAAGGATA GAGAGGGAAG AGATATAAAA
GACCGGTTGA TATGGCAGCA GAAACTACAT AGGGAGTTAC AGGATTTAGT GAGGATACCG
AGGCTGTTGG GGAGTTTTGA GGAGAATAAT AATTACTATC TGGTAATAGA GTATATTAAA
GGGAAATCGC TGCTGAATCA ATTAAAGATC AGAAAAAATT CATTGGCCAT ATTTTATGCG
GATAAAGAAA TCACCGAATG GTCGATGATT GATTATGTGG ATCAGATTGC AAAGTTTCTA
AAAAAGCTTC ATGAGCTGGA TTATGTTCAC AGGGATGTAA CACCAGCAAA TTTCATAGTG
ACACCTGGTG AGAAGGTCTG TGCAATAGAC ATGGAACTTT CTTATTATTT AAAAGATCCG
GATGTACCTC CGTTTCAATT AGGCACATTC GGATATATGT CTCCGCAGCA AAAGAATCAG
TCATCTCCAT CTAAAGAAGA CGATATATAT TCAGTTGGTG CGATATTGTT CGAAGCTATT
ACGGGAATAA ACCCACTCAA GGTGATGAAC TGTTCGACTG AAAATGTACA GTCAAAAATA
AATTTACTGA TCCGAGACAG TAAAACAGCA AATTTATTAT CCAATTGTTT ACATCAGGAT
CCGTCGAAGA GACCCTCTCT TCAAGAAATT TCTGACGAAC TAACTAGTTA TAAAAAGGAT
CTAAAGTCAG GAAAAGAGAG CTATTTAAAC ACGACCTTGA GTCGAATAAA TAAGGATGAA
ATTAAAGCCA CGATAGAGAA TACGATTAAT ACTTTGTCTA GTCCATTATT TGCGGATGAA
ACAAAAGGCT GGTTTTCCGA AAATCTACAC GCCGAAGAAA TAAATAACGA TAAAAACAAA
ATCAATAAGG CATGGTATGC TAGTTTTGGT TTGGGGGCCG CTGGAATTAT ATATACACTA
AGCAATGCAT ACCAACATGG GTTCAATGTC GAATCTACTA AGCCATATGT CGAAATTGGC
ATGAAGTCGA TTGAAGAAAA GTATATTAAT TCAACAACTC CTAAAAATCC AAGTCTGCTT
TTTGGATCTT CAGGTATTGC ATTCACCATT GGAAAATCTA TCGAAACATC TCTTATTTCA
GACGATGCTA AATATAGACA ATGGATTAAA GAGCTGATTA ATCCAGAAAA TTCATCATTA
AATCTTTCTC ACGGGATCGC TGGTCAAGGC TTAGCTATGC TTAATTTGCA AGATACCCTT
GATACTAGTT ACCTAATGAC TACAGCTTCG GAATACGTAC ATAGGATCCT CGCTGCGCAG
GAAAAGAATG GAACCTGGAC AAGTGAAGGT GAAAGTAAAC GGTTATTGAA TGTTTCAATA
TCAAAGGGCT CTTCCGGGAT TCTTTTATTC CTTATTGAAT ATTTAAAACT CACAAAAGAT
AATCACGTTC TTTCTGCAGT TGAAAAAGGC CTACGACAGC TTATGATTAC AGCGGAAGTG
AAGAGAGATT ATATTTTTTG GAAATCACAA TCTGGGAAAG CTTTAAAATA CAACTTTTTA
GACGGCAATT CTGGAATAGC ACTCCTATTG TTAAAAGCAT ACGAAGTATT AGGGGCTTCA
CAATATAAGG ATTACGCTCA GAAAATCTTA ATGGCGATTA AACCGCAAAT AATACATAAC
AATTTAAGTT ATGGCGGTGG CTTATCAGGA CTTGGAGATA TCTATCTCAA ATTCGCAGGT
GTGCTAAAAA ATGATATCTG GAAGGATCGG GCAGATTGGA TTGCGAACTT AGTTATGCAA
TTAGGAAAAG ATGATTCAAT TCATGGAAAC TATTGGTTGA CAGATAGGGA ACGACAACCG
GTAGCGAATT TCATGACTGG TAACGGAGGT ATTATACACT TCCTCGTTAA TTATTACTCG
AGTCTTTAA
 
Protein sequence
MEALTEIIVD DPSLLEKKKS EKKSGNRIGY YYIIIKSLKE SLKNDVVKCF YIKGITNFGL 
CVIKEGTYGD SKDREGRDIK DRLIWQQKLH RELQDLVRIP RLLGSFEENN NYYLVIEYIK
GKSLLNQLKI RKNSLAIFYA DKEITEWSMI DYVDQIAKFL KKLHELDYVH RDVTPANFIV
TPGEKVCAID MELSYYLKDP DVPPFQLGTF GYMSPQQKNQ SSPSKEDDIY SVGAILFEAI
TGINPLKVMN CSTENVQSKI NLLIRDSKTA NLLSNCLHQD PSKRPSLQEI SDELTSYKKD
LKSGKESYLN TTLSRINKDE IKATIENTIN TLSSPLFADE TKGWFSENLH AEEINNDKNK
INKAWYASFG LGAAGIIYTL SNAYQHGFNV ESTKPYVEIG MKSIEEKYIN STTPKNPSLL
FGSSGIAFTI GKSIETSLIS DDAKYRQWIK ELINPENSSL NLSHGIAGQG LAMLNLQDTL
DTSYLMTTAS EYVHRILAAQ EKNGTWTSEG ESKRLLNVSI SKGSSGILLF LIEYLKLTKD
NHVLSAVEKG LRQLMITAEV KRDYIFWKSQ SGKALKYNFL DGNSGIALLL LKAYEVLGAS
QYKDYAQKIL MAIKPQIIHN NLSYGGGLSG LGDIYLKFAG VLKNDIWKDR ADWIANLVMQ
LGKDDSIHGN YWLTDRERQP VANFMTGNGG IIHFLVNYYS SL