| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0965 |
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| Symbol | |
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| ID | 8357079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1156827 |
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| End bp | 1158869 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963119 |
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| Product | alpha-1,2-mannosidase |
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| Protein accession | YP_003120664 |
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| Protein GI | 256420011 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.703559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT CGCTAATATA TCTACTGAGC CTGCTTTCTC TAACGGCAGT TGCTCAGCAA
TCAGGTCAGG TGAATGTGTT CCTGGGTTCT TCCGGGGACA ACGGACAAAT GTCTCCCGCT
GCTTCCTATC CTTTCAGTAT GGTGAGCATT GGTCCCGAAA CGTATCCTTC CACTCATACA
GGATATGAGT ATTATGCTAA AGAATTTCTT GGATTTACCC ACAACCGTAT GGAGGGTGTA
GGCTGCCAGG GTTGCGGTGG TAACCTGCTG CTGCGTCCTT TTCTGGGGGA TGGTCCGGTA
AAAGCGGATC TTATCAAGTA TGAAGAGCAG GCTTCCCCTG GTTATTATCA TGTAGGATTC
ACCAACGGTA TTAAGGCATC TTTTACCGTT TATAAGAATG CAGGTCTGCA TCAGTATACT
TTCCCTGAAG GAAAGAAAGG GCTATTACTG GATCTCGGAT TTGCCCATGT CGGCCGTTTT
GTGGCCGAGG AGCATACCAT AGAAGGTAAT GCAGTAAGCG GATGGGTGGA ATCCAGAACT
ACCTGTAGTG CCGGTATTTA TAGAGTATAT TATTACGTAG AAACTGATCG TCCAGTAAAA
TGGACCGCTA CGCAGGCGCA TGAACTGGTA GCTGATGTAA CTGATAATAA CCTGGGTGTA
AGGATAGGGT TATCCTCCGT TAATGCTACG TATGCAAAGG CAGCTATAAC GAAGGATGCA
TTTGATATGG TAAAGGTTAG GAGTGAGAAA GCGTGGAATG ATATGCTGGG ACATATTAAG
GTGAAAGGGG ATCCTGCAAG GGAGAAGCTG TTTTATTCCC TGTTTTATCG TTCTATCCAG
TCTCCTTATG TAGTATCGGA GCCAGATGGC GCATATGCTG CCACTAATGG TACTTTACAA
CACACTAACA GTAAGATGTA TAATGGCTGG GCGATCTGGG ATAACTACCG TGCGCAGCTA
CCCTTATTGT CTATTGCTTT TCCGCAGGAA TACCAGGACA TGACGAACTC TATTGCAGGG
TTGTATGCCC ATGGTAAAAA AGACTATGCA ACACTGCATG AGCCTTCCAT TACTGTAAGA
ACAGAGCATG CTGTCGTCGT ACTGCTGGAT GCCCTGAAAA AAGGCTATAA GTTCGATTTT
AATGCCATTG CTGACTCTGT AGAGAAGGAA ATTAAAGGAT TGGATTATGC GCATCCTGAT
AAGGCGCTGG AGTCTTCCTA TGATGCGTGG GCACTGGCGG AACTCTATTA TGCACAGAAA
GATAAAGCCC ATGGAGACCA GTATAAAGTT CAGGCGGCAG ATTATAAAAA GTACTGGTTG
AAAGACTTCC AGGATCTCAC AAAACGAGAT GTAGACCGTA TGCAGGCAAG AGGATTGTAC
CAGGGTACGA TCTGGCAATA CCGCTGGTTT GTGCCCTTCG ATCTGAAAGG GTTGATGGAG
CTGTGTGGAG GTGAGCAGGC ATATCTTTCC CAGCTGGATG AATTCTTTGA TAATGATTAC
TACTGTCATG CGAACCAGCC GGATCTGCAG ACGCCGTTCA TGTATAATGT GACCAACCAG
CCCTGGAAGT CACAGGCGCT TGTTCATAAG ATAGCTGTTG ATACCATGGT ACAGCACTAC
TTCAATGATA ACAGTCGTGG TATCGGTTCC GAGATCGGCC CGATCTATAA GAACCAGCCG
GCAGCCTATG TCAGGACAAT GGATGACGAT GCCGGTACGA TGTCTTCCTG GTTTGTACTG
GTATCTACCG GTATATTCCC GGCGTGTATC GGTTCGCCGG TATACTACCT GAACGTGCCT
TTATTTGAGT CTGTTGAATG GCAGTGGCCG GGTGCAAAAC CGTTCTCTGT ACAGGTGAAG
AATTTTGGTC CTAAGAACGT ATATATTAAA GAGGTGTGGC TGAATGGCAG GAAGCTGGAC
CGCAACTGGA TCACGCATAG CGAGATCGCG AAGGGCGGTA AACTGGAGAT TGTAGCCAGT
GATCAACCAG ATATGCAGCA GGGCCTTGGT AATAAATGGA TAGCAGATAT TACCCGCCAG
TAA
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| Protein sequence | MKKSLIYLLS LLSLTAVAQQ SGQVNVFLGS SGDNGQMSPA ASYPFSMVSI GPETYPSTHT
GYEYYAKEFL GFTHNRMEGV GCQGCGGNLL LRPFLGDGPV KADLIKYEEQ ASPGYYHVGF
TNGIKASFTV YKNAGLHQYT FPEGKKGLLL DLGFAHVGRF VAEEHTIEGN AVSGWVESRT
TCSAGIYRVY YYVETDRPVK WTATQAHELV ADVTDNNLGV RIGLSSVNAT YAKAAITKDA
FDMVKVRSEK AWNDMLGHIK VKGDPAREKL FYSLFYRSIQ SPYVVSEPDG AYAATNGTLQ
HTNSKMYNGW AIWDNYRAQL PLLSIAFPQE YQDMTNSIAG LYAHGKKDYA TLHEPSITVR
TEHAVVVLLD ALKKGYKFDF NAIADSVEKE IKGLDYAHPD KALESSYDAW ALAELYYAQK
DKAHGDQYKV QAADYKKYWL KDFQDLTKRD VDRMQARGLY QGTIWQYRWF VPFDLKGLME
LCGGEQAYLS QLDEFFDNDY YCHANQPDLQ TPFMYNVTNQ PWKSQALVHK IAVDTMVQHY
FNDNSRGIGS EIGPIYKNQP AAYVRTMDDD AGTMSSWFVL VSTGIFPACI GSPVYYLNVP
LFESVEWQWP GAKPFSVQVK NFGPKNVYIK EVWLNGRKLD RNWITHSEIA KGGKLEIVAS
DQPDMQQGLG NKWIADITRQ
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