| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0962 |
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| Symbol | |
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| ID | 8357076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1153285 |
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| End bp | 1154679 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963116 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003120661 |
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| Protein GI | 256420008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000066626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.118679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCAT CACAATTATT ATATTTTTGG AATGTCATGA AAATATCCAA AATCCCGGGA
TGTCTCCTGG CGCTGTGCAT TTTGTTTGCT AACTCTGCGG CCCTGAAGGC GCAGGATACC
TGGACACTGC AACGCTCTGT AGATTATGCG CTTCAGAACA ATATATCTAT CAAGCAGCAG
GACGTACAGA AACGTTATGC AGCGTTGACA CTCAGACAAA ACCAGCTATC GCAGCTCCCC
ACCCTTGGCG CTGCTGTACA GGCCCAATTG GGTTCTGGTC GTAATATTGA CCCGTATACG
AACGTGTATG TTACGCAATC TTATTTTAAC CTTGGTGGAG GTGCGAATAC CAATGTTGAT
ATCTTCAACT GGTTTGCAAA ACGTAATATA ATTGCTGCCA ATAAATATGA GTTGCAGGCG
CAGGATCGTT TCCTGGAAAA GGCAAGGAAT GATGTTGCTT TTAACATTGC CAGTACCTTT
CTGCAATTAC TCATGAATAT TGAGCAGGTG CATGTCAGCG AGTTACAGGT AAAACTGACT
ACTTCTCAGC TGGATAATAC CAAGAAACTG GTTATTGCGG GTTCTGTTCC GGAGAGCAAT
CAGGCTGACC TGGAAACCAA ACTGGCGAGT GATAGTGTAA CCCTGATCAC GGCACAGAAC
AATGTGATCA TGTCTACTTT GCAGATGAAG GCGTATCTCA ACCTGAGCTT TGATCAGTCA
TATGTACCAC AGATTCCGGA GAATATTTCA GAATTGAAAG TACCGAGACT GGATGAAGTA
GATCCCGAGA TGGTATATAG TTCTTCCCAG ATGACCAACC CGCTGATAAA GGGGCATGAC
CTGAGAATAA AATCCCTGCA ACGCGCCTAT GCGGCACAGA AAGGGTATTT GTATCCCAGT
TTATCTGCCA ATGGCGCATT GAATACGAGT TACACCGATG TGGCGAAAGA TGGGGCAACA
GGTAAGACAA TCGCTTTTAA CCAGCAGGTA AATAATAACT TCCGTCAGTC CGCAGGCCTG
ACCCTGAATA TTCCGATCCT GAATGGCTGG CAACAGCGTA CAGCGGTACA GCGGGCGAAA
CTGGATATTA CCAATCAGCA GCTGACCAAA GACCAGGATC TGCAAACACT GCGTCAGGAT
ATTTATACTG CCCATGCCAA TGCGGTAGCC GCGATTCAGA AATTCTCCGC ATCCAGTAAG
GGTGTTGATG CTTCCCAGCG TGCGTATGAT TTTGCGACCA AACGGTATAA CCTGGGTTTA
ATGAATACTA TTGACTATAT TACTACGCAA ACTAACCTGT TTAAAGCGCA GATCGATAAA
GTATCGGCGC AATACGAGTT CATATTTAGA ATGAAACTAC TGGAGTTTTA TAGGGATCAA
AAGATCTCCC TGTAG
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| Protein sequence | MLSSQLLYFW NVMKISKIPG CLLALCILFA NSAALKAQDT WTLQRSVDYA LQNNISIKQQ
DVQKRYAALT LRQNQLSQLP TLGAAVQAQL GSGRNIDPYT NVYVTQSYFN LGGGANTNVD
IFNWFAKRNI IAANKYELQA QDRFLEKARN DVAFNIASTF LQLLMNIEQV HVSELQVKLT
TSQLDNTKKL VIAGSVPESN QADLETKLAS DSVTLITAQN NVIMSTLQMK AYLNLSFDQS
YVPQIPENIS ELKVPRLDEV DPEMVYSSSQ MTNPLIKGHD LRIKSLQRAY AAQKGYLYPS
LSANGALNTS YTDVAKDGAT GKTIAFNQQV NNNFRQSAGL TLNIPILNGW QQRTAVQRAK
LDITNQQLTK DQDLQTLRQD IYTAHANAVA AIQKFSASSK GVDASQRAYD FATKRYNLGL
MNTIDYITTQ TNLFKAQIDK VSAQYEFIFR MKLLEFYRDQ KISL
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