| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0960 |
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| Symbol | |
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| ID | 8357074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1150074 |
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| End bp | 1152485 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963114 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120659 |
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| Protein GI | 256420006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000834077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.437277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGAA ACTACATCAG GATAGCGTGG CGGAACCTTA AACGAAATAA GGTATTTGCT
TTTATCAATA TCGGCGGCAT GACGGTAGCT ATTTGCGTTG CGTTATTACT GTGTATTGCG
GCTTACCATG AATGGTCGTT TGATCAGTTT CATGTCAACA GGTCATCATT GTATGAAGTG
TACATGGAAG AGTCTTTGCC CAACGGTAAA ACGGTTGTAG GTGCTAATCA TCCGGCGCCA
TTAATGGCGG CATTACAACA GGAATGCCCC TCTATTAAAC AGGCGACCCG TTATCAGTCC
AGTAAAAGAA GTGTATCGTA CAATGGCAAA ACCCTGTCCA GGGTGATTGG TTTTGCGGAT
ACCACGTTTT TCCGGATGTT CAGTTTTCCG ATACGCAGCG GCAATATCAA TGCCTTGCAG
AACAGGGATC AGGTGTTGAT CTCTGAAGAA ACGGCGAAGA ACATCTTTGG TAATGAGGAT
CCGTTGAATA AGATCATTGA AGTAAAGCTC GGACAGTTAC AGAAGAGCTT TACAGTAGGC
GGGGTGATCG CTAATGTACC GGAGAATTCC AGTATTGATT TTGATCTACT TGTTAACTTT
TCGGCTTTGC TGGAATGGTA TGGTAATGAA AGTTCCTGGT CTTATAGTTC TTATTTCACC
TTTTTACAGG TAAAGGAAAA TACGTCTGCC TCGCTGGTAT TGAAGCAGAT GCAGGGACTG
GTCAATAAGT ACATGTCGGA GAAATTGCAG GGTATGAAGC GGGATGGTGT GCAGCCAGGT
AAGGATGGGG AGCTCCTGCG GTATGGGTTG ATTCCGGTAG GAGATATTCA TTTTGACCGG
CGAAGTGAAT TTGCGGGTAT AGGCAATTTT TACCCCTGGT TACTCGTCAT CATTTCAGTG
ATGGTATTAA CGATTGCTGC GGGGAATTTC ATCAATCTTT CTATGGGCCG TTCATTTACG
CGGGCAGGGG AAATTGGTAT GCGGAAAGCG TTGGGGGCGA AGAGGGGACA GTTGATAGCA
CAGTTCTGGA GTGAGTCGCT TATCCTGTGT GGTATCTCTT TATTTATCGG TATTGTGCTG
GCGTCTTTTG TACTGCCACA GTTTAATGAG TTGTTCCGGT ATCATTTTGA GATGTCTTCT
ATATTTGGAG ACATCCGTAT ACTGTGTGGT ATTGTTGGTG GCTTTCTGTT GATTACTGTA
CTGGCGGGCG GTTATCCAGC CTGGATGATC TCCCGGTTTA AGATGCTGGA AGTGCTGAAG
GGTAAACTGA ACCTGGGCAG AAAGAGTGTT TTCAGGAATG CGTTGATTAT TACGCAGTTT
TCAATAGCGG TACTGCTGAT CAGCTGTACG ATCATTCTCT GGCAGCAATT AACCTATCTG
CGGTCCAAAC CGCTGGGTTA CAATGAGCAT GAAGTGATCA GTATTCCTGT CAATTCGAGT
TTATTGCAGA AGGGCTATGC GCTGTCAAGG TTGAGGACTA TGCTGACTGG TGACCCGCAT
ATTTTGTCTG TCACCGGATC GAATACTAAT ATGGGAGACG GGCTGGATGG CGGCAGGAAT
AGTGCCACCT ATGGCTTTGA TTATAAAGGC CGGGGTGTGA AATGTAACTG GTCGATGGTA
GAATATGATT ATCTTCAGAC ATTGGGTTTG CAACTGGTGA CAGGGCGCGA TTTCTCCCGT
GCATTCGCAA CAGATTCCAG TGCTGTGATC ATCAATGAGC TGATGGCGAA GGAGCTGGGC
GAGAAGGATC CTATAGGGGT TGAAATGGAG GTAACGGGGA AATTTCACGT GGTGGGTGTT
ATAAAGAATT TTAACTTTCA TTCCCTGAAA GAGGAGACTG GCCCGATGAC TATCCAGCTG
ATTCCCGGGA TGAAACCAAT GTATATTTTT GTGCGTGTGT TACCGGCAGA CCTGCCCCTG
GCGATGGAGA AAGTGAAGCA AGCCTGGCAT ACCATTGACC CTGACGGCGA ATTTGAAGGC
TCTTTCCTGG ATGAAAATAT TGACAGAATG TACAGATCGG AAGCCCGGTT GGCAAAGATC
AGTATAAGTG GCGCTGTGGT AGCCATTGTA ATATCCTGCC TTGGTCTTTT TGCTATAGCG
GTACTCGTCA TTGCGCAGCG TAACAAGGAA ATAGGTGTAC GCAAAGTATT GGGTGCTTCC
GTAACAGGTA TTGTGACCCT GATAGCAAAA GATTTCCTGC GGCTGGTATT GTTCGCTATC
CTGATCGCTA CACCTGTAGC CTGGTACCTG ATGCGGGCAT GGTTACAGGA TTTTGCCTAT
CACATTGATG TGAAATGGTG GGTATTCCTG CTGGCTGGAA TTGCTGCCGT TGTGATCGCA
TTCTTCACGA TAAGTTTTCA GTCAGTAAAA GCAGCTTTAA TGAACCCGGT TAAATCACTA
AAAACAGAAT AA
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| Protein sequence | MLRNYIRIAW RNLKRNKVFA FINIGGMTVA ICVALLLCIA AYHEWSFDQF HVNRSSLYEV
YMEESLPNGK TVVGANHPAP LMAALQQECP SIKQATRYQS SKRSVSYNGK TLSRVIGFAD
TTFFRMFSFP IRSGNINALQ NRDQVLISEE TAKNIFGNED PLNKIIEVKL GQLQKSFTVG
GVIANVPENS SIDFDLLVNF SALLEWYGNE SSWSYSSYFT FLQVKENTSA SLVLKQMQGL
VNKYMSEKLQ GMKRDGVQPG KDGELLRYGL IPVGDIHFDR RSEFAGIGNF YPWLLVIISV
MVLTIAAGNF INLSMGRSFT RAGEIGMRKA LGAKRGQLIA QFWSESLILC GISLFIGIVL
ASFVLPQFNE LFRYHFEMSS IFGDIRILCG IVGGFLLITV LAGGYPAWMI SRFKMLEVLK
GKLNLGRKSV FRNALIITQF SIAVLLISCT IILWQQLTYL RSKPLGYNEH EVISIPVNSS
LLQKGYALSR LRTMLTGDPH ILSVTGSNTN MGDGLDGGRN SATYGFDYKG RGVKCNWSMV
EYDYLQTLGL QLVTGRDFSR AFATDSSAVI INELMAKELG EKDPIGVEME VTGKFHVVGV
IKNFNFHSLK EETGPMTIQL IPGMKPMYIF VRVLPADLPL AMEKVKQAWH TIDPDGEFEG
SFLDENIDRM YRSEARLAKI SISGAVVAIV ISCLGLFAIA VLVIAQRNKE IGVRKVLGAS
VTGIVTLIAK DFLRLVLFAI LIATPVAWYL MRAWLQDFAY HIDVKWWVFL LAGIAAVVIA
FFTISFQSVK AALMNPVKSL KTE
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