| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0958 |
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| Symbol | |
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| ID | 8357072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1145205 |
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| End bp | 1147598 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644963112 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120657 |
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| Protein GI | 256420004 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00075656 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGA ATTATCTCAA GATCGCCTGG AGGAATATCA GAAAGCAAAA GTTTTATTCC
TTCATCAATA TACTGGGCCT GACAATAGGT ATGACCTGTT GCTTCCTGAT CTTTATCTAT
GTACGGTTCG AACTGAGTTA TGATAAGTTT CATGAAAAGA AGGATCAGCT TTATCACTTG
TTAACAGATG TAAAAACACC TACAGAGCTC ATTGAGGCAG ATATTACCTC TGGTCCTATG
GGCCCAGCTT TAAAAGCCGA CTTTCCTGAG GTCAGCGCAG CTGTTCGTGT TATTTTCTCA
AATATGGTGG TAACTACGGA TGATGCTAAA TACCAGGAAG ATAAGATTGC TGTTGTTGAT
TCAAACTTCC TTGACATATT TACATTTCCA CTGATAAGCG GAACAAAGGA AACCGCTTTG
GCAGAGCCTT TTTCTGTGGT GCTGACTGAG AGTAAAGCAA AAAAGTACTT CGGTACTGTA
AATGCTGTGG GAAGGTCTGT TCAGATCAAT GGCAGGAAGA ATACCCTTAA AGTTACGGGC
GTCATGAAGG ATGTACCGGA GAATTCACAA ATGCCATTTG ATATGTTGTT TCCGGTGTCT
ACCTATAAGG CATTGGGCGT AGATCTTGAA AACTCCTGGG GGAACTTTGG CGCTATCACT
TACTTACTTC TGGAAAACGG AGTAGATCCG GCAAAATTTG AAAAGAAGCT TCCAGCCTTT
ATGGAGCGTC ATATAGGCGA AAAGATGAAG AAGAACCAGA TGTACTACAC ATTACATCTG
GAACCCTTCA AAGATGTATA TATCCATTCA AAAAGAAAGG GAACAACACT TGTATACGGC
AGCATAACCA ATGTATATAT ATTCTCTTTT GTAGCATTGT TTATTATGTT GATTGCTGTG
ATCAACTTTG TCAATCTTGC AACAGCAAGG GCGACAGAGA GAGCAAGAGA GGTAGGGGTA
CGTAAAGCAG TCGGCGCCTA TGAAGTGCAA CTTACCTTCC AGTTTCTCTG TGAAACACTG
TTATTGAGCC TGGTCGCATT TTTCCTGTCA GCCATATTAT GCCAGCTATT GCTGCCTGCA
TTTAACATGC TTGCCGGAAA GGAAATTGCC GTCAATATAT TTAAAACAGG TATAGTAGGC
TTGTTTCTGC TGATCGCGAT ACTGATTGGC TTGCTTGCAG GTATCTATCC AGCCCTTGTC
TTGTCTTCCT ATGAGCCGGT CGTCGTGTTG AAAGGCGCTT TTAGTAGCAG TAATAGAGGC
TTGCTGCTCA GAAGGGGGTT GGTCGTATTT CAATTTGTGA TCACTATTGT GTTGATTGCG
GGTGTGATTA TTATTTATAA TCAATTGCTG TATATGCAGT CCCATGATCC AGGCTTTAAG
AAAGATCAGC AACTGGTAGT AGAGTTTAAT GGAGTAGATA ACATTAAACA GCATTGGAAG
GAAATAAAAC AACAAGTGGC CGGCGTACCT GGTGTACTTG GTACCTCCTT TTCATCTTCT
GTGCCCGGTA AATTTAATAA TTCCGCTTAC AGTGTGATGG AGTTGAAGAA TGGGGATATG
CAGGCAAGTA ATATCAATCT CTATTTTGTC GATTACGATT TTATCAGGCA GTATAATATT
AAAGTAGTGG CCGGACGTGC CTTCTCTGAA GAGATGGGGA CTGACAGTAC GGAGGCAATG
GTTGTGAATG AAGCTACGGT AGCTTCCCTC GGATATAGTA AGCCTGAGGA AATCATTGGT
AAAAAGTTTT CTCAGTGGGG ACGGGAAGGA AAGGTAATAG GTGTTATTAA AAATTTTAAT
TACCGCTCAT TACGTGAGGA AATCGCTCCG TTAACCATAC GTATAGGTCC TGATGCATAT
ACGCCAATGA CTATTACTGC TACAGGCGCC AGCTTAAAGA CCGTATTGGC AAATGTTGAA
AATATTTACA ATCGATATGC GCCTGATGGA AGGTTTGAAT ATTATTTCCT GGATGAGGCA
TTTGACAAAC AGTATCGTGC TGAGTACCGT TTTGGTCGCC TGGTGCTGAC ATTTACAGTA
TTGGCTATTT TTCTTGCCAC TTTAGGTTTG TTGGGCCTTA TCTCCTATAT CGTGATCCAG
CGTACCAAAG AGATTGGGAT CCGTAAGGTA TTGGGTGCTT CTGTGAGCAG CATTTTATTC
CTGCTGTCCA GCGACTTCCT GAAGCTTGTG GTAATCGCTC TGCTGGTAGC CACGCCATTG
GCCTGGTACC TGATGTACCA GTGGCTGAAA GATTTTGCAT ACCGTGTCGA TATTCAATGG
TGGGTATTTG TGTTGTCCGG CGGTATTGCA GTCATCCTTG CATTGATCAC CGTTTATGTG
CAGACTGTAA AGACAGCGCT GACAAGTCCG GTGAAATCAT TGCGTACTGA ATAA
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| Protein sequence | MLKNYLKIAW RNIRKQKFYS FINILGLTIG MTCCFLIFIY VRFELSYDKF HEKKDQLYHL
LTDVKTPTEL IEADITSGPM GPALKADFPE VSAAVRVIFS NMVVTTDDAK YQEDKIAVVD
SNFLDIFTFP LISGTKETAL AEPFSVVLTE SKAKKYFGTV NAVGRSVQIN GRKNTLKVTG
VMKDVPENSQ MPFDMLFPVS TYKALGVDLE NSWGNFGAIT YLLLENGVDP AKFEKKLPAF
MERHIGEKMK KNQMYYTLHL EPFKDVYIHS KRKGTTLVYG SITNVYIFSF VALFIMLIAV
INFVNLATAR ATERAREVGV RKAVGAYEVQ LTFQFLCETL LLSLVAFFLS AILCQLLLPA
FNMLAGKEIA VNIFKTGIVG LFLLIAILIG LLAGIYPALV LSSYEPVVVL KGAFSSSNRG
LLLRRGLVVF QFVITIVLIA GVIIIYNQLL YMQSHDPGFK KDQQLVVEFN GVDNIKQHWK
EIKQQVAGVP GVLGTSFSSS VPGKFNNSAY SVMELKNGDM QASNINLYFV DYDFIRQYNI
KVVAGRAFSE EMGTDSTEAM VVNEATVASL GYSKPEEIIG KKFSQWGREG KVIGVIKNFN
YRSLREEIAP LTIRIGPDAY TPMTITATGA SLKTVLANVE NIYNRYAPDG RFEYYFLDEA
FDKQYRAEYR FGRLVLTFTV LAIFLATLGL LGLISYIVIQ RTKEIGIRKV LGASVSSILF
LLSSDFLKLV VIALLVATPL AWYLMYQWLK DFAYRVDIQW WVFVLSGGIA VILALITVYV
QTVKTALTSP VKSLRTE
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