| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0957 |
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| Symbol | |
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| ID | 8357071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1142825 |
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| End bp | 1145182 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963111 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120656 |
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| Protein GI | 256420003 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.439448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACA ACTATCTGAG AGTGGGCTGG CGCAATCTCT GGCGCTATAA AATGTACAGC
AGTATCAATA TTGGCGGTCT TGCGCTCGGA TTGGCATTGG GCATTCTGTT ACTTGTATGG
GTACAGGATG AGTTAAGCTA TGATAGGTTT CATGAAAAAG GTTCTAATAT TTATAAGGCT
TCGGTTACGT TCACTTCAGG CGCCGATGTG CAGAGTTGGA ACCAAATGCC TGCGCCGCTT
GCCCTGCATG CTGTAAAAAG GATCGCAGGT GTGCAGCAGG CTGTGCGTAT GGCGCCGAAC
TGGGGGACGA TCTCTAAATT CACTTATAAC AATAAGGATA TCCATGATGT CAAGCTGGCT
TTTGTGGAAC CTTCCTTCTT TACCCTATTT ACATTCCCTA TATGGAAAGG AAGTACGAAT
AAGCCTTTTA CCGACAATTC ATCGCTGGTC ATAACGCGTA GTGCGGCTAA ACGTTATTTC
GGCACTGAAG ACGCTGTTGG GAAGGTGATA ACCGGTGATA AAGATCAATA TGTTGTAAGT
GCGGTATTGG AAGATTTCCC GATACAATCC ACTATCCAAT ATGATTTCCT CATGCCTTAT
GGTATCCTGC AGCAAAAGTT CACGAAGGGG GATTACTGGC AATCGATGGA TGAGGATTGG
GGAGATTTCG TTTTCGATAC TTACTTTTTG CTGGCCCCAG GGACATCTGT GGCGAAGGTT
AGTAAAGAAC TGGCAATGTT GCGTCCTGAT GCGAAGCCGG ATCCAAATGT ACGTTACAAT
CTTCAGCCAT TGTATGACAT GCACCTGTAT AATCCGGACC TGTCAGAAGG AACAATTAAG
ATTGTCAGAA TATTCCTGAT CATTGCGGTA GTGATACTAT TGATCGCCTG TGTAAACTAT
GTAAATCTAT CAACCGCCAG AGCTATGCAG CGTGCCGCTG AAGTGGGGGT ACGTAAGCTC
ATCGGTGCCA CCAGAAGACA ACTGTTTATG CAATTTGTAG GAGAGTCGGT GCTGGTGTTT
ATGTTATCGC TTGTGCTGGC TATTGCACTC ATTTTATTAC TGATACCATT CTATAATAAT
CTCACAGGCA AACAGCTTTC TTTTAGTCTG CAAAACTTCC AGATGGTACT GGCTATTGGA
GCTGCTATGC TGCTGACACT GATTGTTGCA GGCATCTATC CGGCTGTATT GCTGTCATCA
TTTAACCCCT TAAAGACATT AAAAGGCGGA CTGGCCTTAT CAGGTGGGAA CATCAGTTTC
CGCAGGGTAC TGGTAGTCGT ACAGTTTCTG ATAGCCACGG TGCTTATTGT AAGTACAATC
GTTGTAGGTC AGCAATTGCG CTATATAAAA AATAAGGCGA TCGGCTATGA CAAAGAGAAT
GTATTTATGT TCAATGGAGG CGCTATGTCT GCGCATATGC AGACTGCCTT ACAGGAGTTA
AGTACAGCGC CCGGCGTTAT TGCAGCTGCG AATGCCAATA CAAGGATGAC ATCTATTGAT
AACAGTACCG GTGACACAGA ATGGGATGGT AAAAGTAATC AGGAGTCGAT GATTGCGCAT
ACCATCAGCG GGGACAAAAA CTTTATGGAG ATGATGAAGC TCCAGTTTAC GGCCGGACAA
AACTTTACCA ATTCAAAAGC TGATTCCAGT CACTATATCA TCAACGAAAC CGCTGCAAAG
ATGATGGGTA TGAAAGACCC TGTTGGCAAA CGTTTCAAGC TCTGGCGATT TGACGGTACC
ATTGTCGGTG TAGTAAAAGA TTTTCACTAT GCATCTATGC ATGAAAAGAT AGGTCCTGTC
GTATTCTATT ACAGGGAGGA TAACAATATT GTGTATGTGA AAACAAAACC TGGTCAGGCG
CAACAGGCTA TCACTTCAGC ACAACAGTTA TATAAAAGAT ATAATGCCGG CGCCCCTTTT
AACTATGCGT TTATTGATCA GAGCCTGGAT AACATGTATA AGCTGGACAG ACGCACAGGA
AAACTGTTTA ATTACTTTGC CGGTATTGCG ATCTTCATCA GCTGCCTGGG ATTGTTTGGG
CTCGCCACTT TTGCTACAGG ACAACGTGTA AAAGAAATTG GTGTGAGAAA GGTATTGGGC
GCTTCTGTTA CCAATATCGT TGCACTGCTG ACCAGCGACT TCCTGAAAAT AATATTGATC
TCTATCGTGT TGGCTATCCC TGCCGCCTGG TATATTATGA ACAGGTGGCT GGATGACTAT
GCTTACCGCA TCAGCATCAG CTGGTGGGTA TTTGCCATCG CGGGTTTACT TGCTGTAGCT
GTAGCCCTGC TGACTGTAAG TTTCCAGGCC ATCAAAGCCG CATTAAGAAA TCCTGTACGC
TCATTAAGAA CTGAATAG
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| Protein sequence | MLNNYLRVGW RNLWRYKMYS SINIGGLALG LALGILLLVW VQDELSYDRF HEKGSNIYKA
SVTFTSGADV QSWNQMPAPL ALHAVKRIAG VQQAVRMAPN WGTISKFTYN NKDIHDVKLA
FVEPSFFTLF TFPIWKGSTN KPFTDNSSLV ITRSAAKRYF GTEDAVGKVI TGDKDQYVVS
AVLEDFPIQS TIQYDFLMPY GILQQKFTKG DYWQSMDEDW GDFVFDTYFL LAPGTSVAKV
SKELAMLRPD AKPDPNVRYN LQPLYDMHLY NPDLSEGTIK IVRIFLIIAV VILLIACVNY
VNLSTARAMQ RAAEVGVRKL IGATRRQLFM QFVGESVLVF MLSLVLAIAL ILLLIPFYNN
LTGKQLSFSL QNFQMVLAIG AAMLLTLIVA GIYPAVLLSS FNPLKTLKGG LALSGGNISF
RRVLVVVQFL IATVLIVSTI VVGQQLRYIK NKAIGYDKEN VFMFNGGAMS AHMQTALQEL
STAPGVIAAA NANTRMTSID NSTGDTEWDG KSNQESMIAH TISGDKNFME MMKLQFTAGQ
NFTNSKADSS HYIINETAAK MMGMKDPVGK RFKLWRFDGT IVGVVKDFHY ASMHEKIGPV
VFYYREDNNI VYVKTKPGQA QQAITSAQQL YKRYNAGAPF NYAFIDQSLD NMYKLDRRTG
KLFNYFAGIA IFISCLGLFG LATFATGQRV KEIGVRKVLG ASVTNIVALL TSDFLKIILI
SIVLAIPAAW YIMNRWLDDY AYRISISWWV FAIAGLLAVA VALLTVSFQA IKAALRNPVR
SLRTE
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