| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0956 |
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| Symbol | |
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| ID | 8357070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1142091 |
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| End bp | 1142780 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963110 |
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| Product | ABC transporter related |
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| Protein accession | YP_003120655 |
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| Protein GI | 256420002 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACGTA CAGTCAATCT TCAAAAGATT TTTACAACAG AAGAAATTGA GACTTCTGCA
TTGAATGGCA TTAACATGGA AGTAAAGGAT GGTGAATTCG TTGCTATCAT GGGTCCTTCA
GGTTGTGGTA AATCCACCTT GCTGAATATT CTGGGTTTGC TGGATAACCC TAGTGGCGGG
GAATATCATT TCTGGGACCA TGAAGTAGCG CGTATGAGCG AACGTCAGCG TGCACAACTC
AGAAAGGGTT CTATTGGTTT CGTATTCCAG AGTTTCAACC TCATTGATGA ACTGACTGTA
TTTGAAAACG TAGAGTTACC GCTCTTGTAT CTGAAGGTAC CTGCCAGTGA GAGGAAGGAG
AAAGTTGAGA AAGTGCTGGA GCGTATGAAT ATCATGCATC GCCGTAATCA CTTCCCGCAG
CAGTTATCCG GTGGTCAGCA GCAGCGTGTG GCGATTGCCC GTGCGGTAGT AGCTAATCCG
AAAATGATAT TGGCGGATGA GCCTACCGGT AACCTGGATT CTACGAATGG TGAAGAAGTA
ATGAAGTTGT TGCAGGAGCT GAATGAGGCC GGTACTACGA TGATCATGGT AACGCACAGT
CCTTATGATG CTGGTTTTGC ACACCGTGTT GTCAACTTAT TTGACGGTCG CGTAGTGACT
GAAAATATCA AAGAACAATT CCACGTATAG
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| Protein sequence | MIRTVNLQKI FTTEEIETSA LNGINMEVKD GEFVAIMGPS GCGKSTLLNI LGLLDNPSGG
EYHFWDHEVA RMSERQRAQL RKGSIGFVFQ SFNLIDELTV FENVELPLLY LKVPASERKE
KVEKVLERMN IMHRRNHFPQ QLSGGQQQRV AIARAVVANP KMILADEPTG NLDSTNGEEV
MKLLQELNEA GTTMIMVTHS PYDAGFAHRV VNLFDGRVVT ENIKEQFHV
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