| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0950 |
|---|
| Symbol | |
|---|
| ID | 8357064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1132916 |
|---|
| End bp | 1134514 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644963104 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_003120649 |
|---|
| Protein GI | 256419996 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAA CAGATTTCTT AGTTATTGGT TCCGGTATAG CAGGATTGAC CTATGCCCTC
AAGGTAGCGG CAGCATGTCC TGACAAGAAA ATTACCATCA TCACCAAATC ACATGAGGAT
GAGACCAATA CCAAATACGC ACAGGGTGGA GTTGCTGTAG TGAACGATCT CGAAAACGAC
AGCTTTGAAA AGCATATTGA AGACACACTG ATCGCAGGTG ATGGGCTCTG CAATGAAGAG
ATTGTGGAAA TAGTGGTAAA GGAAGGACCA GAACGTGTCA ACGAGATTAT TGAATGGGGC
GCCAACTTTG ACAAAAACGC AGCCGGAGAT TTCTCCCTGG GTAAAGAAGG CGGTCATTCT
GAATTCCGCG TGATCCACTA CAAAGACGTT ACCGGTAAAG AAATAGAACG TGCGCTGCTC
GATGCAGTAC ACAAGCAACC CAATATTGAG ATGGTCACCC ATTGCTTCGT GGTAGACCTG
ATCACCCAGC ATCACCTGGG ATACCTCATT ACGAAATCTA CTCCCGATAT AGCGTGTTAC
GGCGTATACG TACTGAACCT GCTGACCAAC AAGATCGAAA AGATCCTCAG CCGCATTACC
GTGCTGGCTA CCGGTGGTAA TGGACAGGTA TACCGCAGTA CCACCAATCC GACTATTGCC
ACCGGTGATG GCGTAGCAAT GGTATACCGT GCAAAAGGCA GAATCGAGAA CATGGAGTTT
ATCCAGTTCC ACCCGACCGC CCTGTATCAA CCTGGCGTGA ACAACGCTTT CCTGATTACA
GAAGCAGTAC GTGGCGACGG CGGTATACTG CGCAATATAC ACGGAGAGGA TTTCATGCAT
AAGTATGATC CGCGTCTTTC ACTCGCCCCA CGCGATATCG TGGCAAGAGC GATAGACAGT
GAAATGAAGA TCACCGGTAC AGAGTACGTA TATCTCGACT GCCGGCACAT GGATCAGGAG
AAGTTCATTC ATCACTTCCC CAACATCTAT GAAAAATGCC TGGCATCCGG CATAGATGTA
AAGAAAGACA TGATTCCCGT AGCACCCGCA GCCCACTATA GTTGCGGCGG CATCAAGGTA
AATGAATACG GACGTACGTC CATCAATAAC CTGTATGCCT GCGGAGAATG TTCCAGTACA
GGTCTGCATG GCGCAAACAG GCTGGCATCC AACTCACTGC TGGAAGCAAT GGTGTTTGCA
CATCGTTGTT ACCTGGACGG CGTGCAAAAA ATTAACAGCA TCACACATAA GGTGCATGTA
CCTGACTGGA ATGCAGGTGG TACGACAGCC CCAAAAGAAA TGATCCTGAT CACCCAGAGC
CTGAAAGAGC TCAAACAGAT CATGAGCGAT TATCTCGGTA TCGTCCGTAC AAATGAACGT
ATGCAGCGTG CAAGCCGCAG GCTGGATATT CTGCATGAAG AAACAGAACA GTTGTACGAA
AGAACAGAGG TATCCCCTCA GTTGTGTGAA TTAAGAAACC TGATCACCGT CGGCTACCTG
ATTGTAAAAG GAGCTTCATT CCGTAAGGAA AGCCGCGGTT TACACTTTAA TACAGACTAT
CCTCAGAAGA GCGCCCTTGT ACAGAATATT GTGTTATAG
|
|---|
| Protein sequence | MEQTDFLVIG SGIAGLTYAL KVAAACPDKK ITIITKSHED ETNTKYAQGG VAVVNDLEND
SFEKHIEDTL IAGDGLCNEE IVEIVVKEGP ERVNEIIEWG ANFDKNAAGD FSLGKEGGHS
EFRVIHYKDV TGKEIERALL DAVHKQPNIE MVTHCFVVDL ITQHHLGYLI TKSTPDIACY
GVYVLNLLTN KIEKILSRIT VLATGGNGQV YRSTTNPTIA TGDGVAMVYR AKGRIENMEF
IQFHPTALYQ PGVNNAFLIT EAVRGDGGIL RNIHGEDFMH KYDPRLSLAP RDIVARAIDS
EMKITGTEYV YLDCRHMDQE KFIHHFPNIY EKCLASGIDV KKDMIPVAPA AHYSCGGIKV
NEYGRTSINN LYACGECSST GLHGANRLAS NSLLEAMVFA HRCYLDGVQK INSITHKVHV
PDWNAGGTTA PKEMILITQS LKELKQIMSD YLGIVRTNER MQRASRRLDI LHEETEQLYE
RTEVSPQLCE LRNLITVGYL IVKGASFRKE SRGLHFNTDY PQKSALVQNI VL
|
|---|
| |