| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0947 |
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| Symbol | |
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| ID | 8357061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1130773 |
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| End bp | 1131582 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644963101 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003120646 |
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| Protein GI | 256419993 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAC TATTAGACGG ACAGATTGCA CTCGTTACCG GCAGCAGTAG CGGTATTGGC
GCTGCTATTG CGGTGGCTTT CGGCGAAGCC GGGGCTACAG TTGTGGTGAA CCATCACAGT
GACAAAAGTC TGAAAGGCGC CGAAGAAGTA CTGGCTAAAA TCAAAGCAGC GGGCAGCGAC
GGTTTTGTTC AGCAATGCGA TATCAGTAAA GAAGACGAGG TAAAGAAGAT GTATGCGGAA
ATCTTTTCCC GCTTTGGTAC TGTAGACATA GTTGTGGCCA ATGCCGGTAT CCAGCAGGAC
GCCAATCTGT TTGACATGAC GCTGGAGCAG TGGAATACAG TGATTAATAC CAATCTGACA
GGCCAGTTCC TTTGTGCGCG TGAAGCCGCG CGGGAATTCA GACGCAGAGG TGTTGTGGAA
GGCCGCTCCA AAGCTGCCGG AAAGATCATC TGTATGAGCA GTGTACATGA AGTGATTCCA
TGGGCAGGAC ATGTGAATTA TGCGGCCAGT AAAGGTGGTG TGAAGCTGTT GATGCAGTCT
ATGGCACAGG AGCTGGCGCC GCATCGTATC AGGGTTAACG GACTGGCTCC CGGGGCTATT
AAAACCCGTA TCAATGAAGA TGCCTGGGAT ACGCCCGAAG ATGAGAAAAA GCTGCTGGAA
CTCATTCCAT ATGGCAGGGT AGGAATACCG GAAGACGTTG CAAAAGCGGC TGTGTGGCTG
GCCAGTGACG AGAGTGATTA TGTGACGGGA ACGACCCTGT TTGTGGATGG TGGCATGACC
CTTTATCCTG GTTTTGCAGA TAATGGTTGA
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| Protein sequence | MGKLLDGQIA LVTGSSSGIG AAIAVAFGEA GATVVVNHHS DKSLKGAEEV LAKIKAAGSD
GFVQQCDISK EDEVKKMYAE IFSRFGTVDI VVANAGIQQD ANLFDMTLEQ WNTVINTNLT
GQFLCAREAA REFRRRGVVE GRSKAAGKII CMSSVHEVIP WAGHVNYAAS KGGVKLLMQS
MAQELAPHRI RVNGLAPGAI KTRINEDAWD TPEDEKKLLE LIPYGRVGIP EDVAKAAVWL
ASDESDYVTG TTLFVDGGMT LYPGFADNG
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