Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0944 |
Symbol | |
ID | 8357058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1127702 |
End bp | 1128379 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644963098 |
Product | peptidase M22 glycoprotease |
Protein accession | YP_003120643 |
Protein GI | 256419990 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCTTTAA TACTGCATAT AGATACAGCA ACTTCAGTAG GGTCTGTTTG TTTGTCAAAA GATGGACAGG CATTGCAGAC ATTGGTGAAT GATAAACAGC AGGACCATGC TGCGAGTATG GTATTGTTTG TAAAAGAAAT CATGCAGCAG CAGGGTGTTA CACCTGCTGA TCTTGATGCG GTTGCAGTCA GCGCGGGACC TGGGTCTTAT ACAGGATTAA GGGTAGGTGT AGCTACGGCA AAAGGACTTT GTTATACATG GGAAAAACCA TTGATAGCTG TATCGACCTT ACAGATGATG GCGCAGGGTA TATTATCCCG TACAAATGAT ACAGGCGCAT TGTATTGCCC GATGCTGGAT GCGCGGAGAA TGGAAGTATA CACAGCTATC TATGATGGGT CGTTGAATAT CGTAATTGCT CCCCATGCGT TAATACTCAC TTCTGAAGCA TTCAGTGAAC AGATTGCAAA ACATAAAATA TACTTTTTTG GAAACGGTAG TGACAAATGG CAACAGTTAA TGCCATCAAA CCATAATGCG TTGTTTCTTC CTTATATATT GAATGCTGCG GATATGGTAC CGTTAGCTAC AGCGGCTTTT GCACGTAAAG CATTTGAAGA TGTGGCGTAT TTCAGCCCAT TTTACCTCAA ACCTTTCCAT TCTACCATGA AAAAATAG
|
Protein sequence | MSLILHIDTA TSVGSVCLSK DGQALQTLVN DKQQDHAASM VLFVKEIMQQ QGVTPADLDA VAVSAGPGSY TGLRVGVATA KGLCYTWEKP LIAVSTLQMM AQGILSRTND TGALYCPMLD ARRMEVYTAI YDGSLNIVIA PHALILTSEA FSEQIAKHKI YFFGNGSDKW QQLMPSNHNA LFLPYILNAA DMVPLATAAF ARKAFEDVAY FSPFYLKPFH STMKK
|
| |