Gene Cpin_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0944 
Symbol 
ID8357058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1127702 
End bp1128379 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content42% 
IMG OID644963098 
Productpeptidase M22 glycoprotease 
Protein accessionYP_003120643 
Protein GI256419990 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTTTAA TACTGCATAT AGATACAGCA ACTTCAGTAG GGTCTGTTTG TTTGTCAAAA 
GATGGACAGG CATTGCAGAC ATTGGTGAAT GATAAACAGC AGGACCATGC TGCGAGTATG
GTATTGTTTG TAAAAGAAAT CATGCAGCAG CAGGGTGTTA CACCTGCTGA TCTTGATGCG
GTTGCAGTCA GCGCGGGACC TGGGTCTTAT ACAGGATTAA GGGTAGGTGT AGCTACGGCA
AAAGGACTTT GTTATACATG GGAAAAACCA TTGATAGCTG TATCGACCTT ACAGATGATG
GCGCAGGGTA TATTATCCCG TACAAATGAT ACAGGCGCAT TGTATTGCCC GATGCTGGAT
GCGCGGAGAA TGGAAGTATA CACAGCTATC TATGATGGGT CGTTGAATAT CGTAATTGCT
CCCCATGCGT TAATACTCAC TTCTGAAGCA TTCAGTGAAC AGATTGCAAA ACATAAAATA
TACTTTTTTG GAAACGGTAG TGACAAATGG CAACAGTTAA TGCCATCAAA CCATAATGCG
TTGTTTCTTC CTTATATATT GAATGCTGCG GATATGGTAC CGTTAGCTAC AGCGGCTTTT
GCACGTAAAG CATTTGAAGA TGTGGCGTAT TTCAGCCCAT TTTACCTCAA ACCTTTCCAT
TCTACCATGA AAAAATAG
 
Protein sequence
MSLILHIDTA TSVGSVCLSK DGQALQTLVN DKQQDHAASM VLFVKEIMQQ QGVTPADLDA 
VAVSAGPGSY TGLRVGVATA KGLCYTWEKP LIAVSTLQMM AQGILSRTND TGALYCPMLD
ARRMEVYTAI YDGSLNIVIA PHALILTSEA FSEQIAKHKI YFFGNGSDKW QQLMPSNHNA
LFLPYILNAA DMVPLATAAF ARKAFEDVAY FSPFYLKPFH STMKK