| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0940 |
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| Symbol | |
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| ID | 8357054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1123164 |
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| End bp | 1124714 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963094 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003120639 |
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| Protein GI | 256419986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGG AACTTATTAT AAATGCGGCA CCTACTGGTG TGGAAATAGC GTTGCTGGAA
GATAAGAAAC TGGTGGAATT GCATCACGAA AGCGGCAATC CCAACTTTTC TGTAGGGGAT
TTATACCTCG GGCGGGTGAA AAAATTGATC CCGGGCCTTA ATGCGGCTTT TGTTGATGTG
GGTTTCGAGA AAGATGCTTT CTTACATTAC ACAGACCTTA GCCCATATAT ACGTTCTATA
CTCAAATTTA CCCAGCAGGC TATTTCAGAT AAAACCCCAG AGGGGTTTGA CTTTACAAAG
TTTAAGAATG AGCCGGAGAT TGTAAAAACC GGCAAAATCA CAGATGTGCT GGGCGGTAAG
CCTAACATCC TGGTGCAGAT CTTAAAAGAA CCGATTTCCT CCAAAGGTCC TCGTCTTAGT
TGCGAAATTT CTCTTCCCGG AAGATTCATC GTGTTAACAC CCTTTAATGA CATTGTCGCA
GTATCTAAAA AGATACACTC TTCCGAAGAA AGAAAAAGAC TACAAAAAAT AGTCGAAGCG
ATCAAAACAC CCAATTTTGG TGTGATCGTA CGTACCGCGG CAGAAGGAAA GAAAACGGCT
GAACTGCATG AGGACCTGAC AACACTTGTG GAAACCTGGA AAAATATTCA GGCTAACCTG
CGCGGTGCAC AACCTCCGCA GAAAATCCTG AGTGAACAGG CCAAGACTAC CAGCATCTTA
CGTGATCTTC TTAACGAGAG CTTTAACCGA ATTGTGATCA ATGATCGCAA CATGTATTCT
GATACCAGGG CCTATATCCA AAAGATTGCC CCTGAAAAAC AGGATATTGT ACAGCATTAT
CACAACGGCG CTCCTATCTT CGATCATTAT GGCGTTACCC GCCAGGTGAA AGCTTCCTTC
GGGAAAACAG TCAACCTGGA CAGTGGCGTA TACCTGATCA TAGAAGCGAC AGAAGCTTTA
CATGTCATCG ACGTTAACAG CGGATACAAA AGCTCCAGCA ATAACCAGGA ACAGAATGCC
CTCGCATCCA ACCTGGAAGC TGCTGCAGAA ATAGCCCGTC AGTTACGACT CCGTGACCTG
GGTGGTATCA TCATCATCGA CTTCATTGAT ATGAAGTTGC CGGAGAATAA GAAAGTAGTA
TACGAAGCCA TGGAGAAATT CATGGCGCAG GACAGAGCAA AACACACCAT CCTGCCTATT
TCGAAATTCG GTCTGATGCA GATCACCCGC CAACGCGTGA AACCCGAAGT CACTATTTCA
GTCGCAGAAG ATTGCCCTAC CTGTCACGGT ACCGGTAAAA TCGGCGCTTC CGTTCTGATC
ATTGACGAAG TCGAAAAGAA CCTGCAATAC CTGATCAACC ATCAGCATAA AGGTCTTACT
CTCAGGGTAC ACCCTATATT TTACTCCTAC CTGGCCAAAG GATTCCTTAC CTCCCGCCAG
TGGAAATGGT ACTTCCAGTA CAAGAAATGG GTCAAGGTTA AAGCTGACTC CAACTACCAT
CTGACAGAAT ATCGCTTCTT TGATGCCAAC GAGGAAGAGA TCAAATTATA A
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| Protein sequence | MNKELIINAA PTGVEIALLE DKKLVELHHE SGNPNFSVGD LYLGRVKKLI PGLNAAFVDV
GFEKDAFLHY TDLSPYIRSI LKFTQQAISD KTPEGFDFTK FKNEPEIVKT GKITDVLGGK
PNILVQILKE PISSKGPRLS CEISLPGRFI VLTPFNDIVA VSKKIHSSEE RKRLQKIVEA
IKTPNFGVIV RTAAEGKKTA ELHEDLTTLV ETWKNIQANL RGAQPPQKIL SEQAKTTSIL
RDLLNESFNR IVINDRNMYS DTRAYIQKIA PEKQDIVQHY HNGAPIFDHY GVTRQVKASF
GKTVNLDSGV YLIIEATEAL HVIDVNSGYK SSSNNQEQNA LASNLEAAAE IARQLRLRDL
GGIIIIDFID MKLPENKKVV YEAMEKFMAQ DRAKHTILPI SKFGLMQITR QRVKPEVTIS
VAEDCPTCHG TGKIGASVLI IDEVEKNLQY LINHQHKGLT LRVHPIFYSY LAKGFLTSRQ
WKWYFQYKKW VKVKADSNYH LTEYRFFDAN EEEIKL
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