| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0929 |
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| Symbol | |
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| ID | 8357043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1112803 |
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| End bp | 1113381 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644963083 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003120628 |
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| Protein GI | 256419975 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTT TACACCATAA TATCATGAAA GATGCTGATG ATGCCGTGTT GATCCTGGAG
TACAAACGCT CCGGTCAGCT CGACTATCTG GCTGCGTTGT ACCAACGCTA CATGAATCTG
GTATATGGTG TATGTCTCCG CTATTTTGAT GAAGAGTCCA GTAAGGATGT CGTTATGCAG
ATCTTTGAGG AGCTGATCGT TAAGTTGCAG CAGCATGAGG TTCAGAACTT TAAGAGCTGG
CTGCATGTGC TGACGAAGAA CCATTGTCTG ATGAAACTGC GTTCCATGAA AAACAGGGAG
GGAAAGGAAA TTTCCCTTGA CGGACTACCT GTTATGGAAA ATGACTCTTT TGCACATCAT
GAGAATGGAG TTAACATAGA AGTACATCTG CAGGGCATGG AAAAATGCCT GGATGCTTTG
CCGGAAGAGC AGAAGCGAAG TGTAGATCTA TTCTATCTCA AAGAGAAAAG CTATAAAGAG
GTCGCGGATA TCACCGGATA TGACATGAAA AAGGTCAAAA GTTATATCCA GAATGGTAAG
CGCAACCTGA AAATCTGTAT GGAACAACAA GATGCCTGA
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| Protein sequence | MAFLHHNIMK DADDAVLILE YKRSGQLDYL AALYQRYMNL VYGVCLRYFD EESSKDVVMQ
IFEELIVKLQ QHEVQNFKSW LHVLTKNHCL MKLRSMKNRE GKEISLDGLP VMENDSFAHH
ENGVNIEVHL QGMEKCLDAL PEEQKRSVDL FYLKEKSYKE VADITGYDMK KVKSYIQNGK
RNLKICMEQQ DA
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