Gene Cpin_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0927 
Symbol 
ID8357041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1109102 
End bp1111186 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content46% 
IMG OID644963081 
ProductComEC/Rec2-related protein 
Protein accessionYP_003120626 
Protein GI256419973 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTTA GCTTTCTGAA AGGTGCGCCA TTTCTGCGCC TGATAATAGG TGTATCCGCA 
GGCATATTTA TACAAATATT TCTGTCATTA AATGTCCCGA TGATATTAGC TGTAATGGCT
TTTGCGGGCG TGTTGTTGTT TGTTTCAGCA AGACTGCCAC TGGTAGTACG ATATCGGTAT
GACTGGTGGC GGGGCATTGC CTTACAATGC CTGGTTGCCG GTAGTGGATG TTTGCTGGTC
GTGTTGTCAG ATGTGCGTTA TCACGGTTAT TATTTTGAAA ACAGTGTTCA AGCCGGAGAT
CTGCTGCAGG TAAGGCTGGA GGAGCCGGTG CAGGCAAAGA AAAAGACGTT TAAAACGATC
GCTCAGGTAC GATATGTTGT ACGTGGCAAC ATGCGTATAC CTGCAAAGGG GCGTTTACTG
GTTTATTTAC AGATCGACAG TAATGCCCGT CGATTGCGAC AGGGAGATCA GTTATTGATA
AAGAATAACA GTGTCCCTGT ATCGCGTAGT GGTAATCCGG GTGCATTTGA TCACCGGAGT
TATTGTGAAT GGCAGCAGAT TTACCGGCAG GTGTATCTGC AACAGGATGC CTGGCATTTG
TTGCAGGAAA GAGAGGAATC TTCTATACAA AGGTGGCTGC ATGTAAGTCG CGGGTATTGT
TTACAAACCT TGCAGCAGTA TATCGGTGGG CGCGAAGCTG CATTAGCGGC GGCTTTGCTG
ATAGGATACC GCTATGATCT GGATCCGGAG ATGGTACAGG ATTATACGAA TACGGGTATC
GTTCATATTA TCGCTATTTC GGGTATGCAC CTGGCGCTGA TATATGGCGC TTTGTTATGG
TTGTTGCGCT GGTGGCCTGC GCAGCGTTTC GCCGACATGC TGAAAGGAAT ATTGATTATT
GTATTGCTGT GGGCATTTAC ACTGTTGACG GGAGGAGCGG CCTCTGTCTT ACGTGCGACC
GTGATGTTTA CTTTTCTGAC ACTGGGGAAG TTTTTGCTGC AACGGCATAC GAATGTATAT
AATACCCTGG CGGCATCCGC ATTCCTGTTA TTGTGTTATG AACCCAGGTT ATTGCTGGAT
GTAGGTTTTC AGCTGTCGTA CCTGGCAGTA CTGAGTATTG TAGTGGCTTA CCGCCGCTTA
TATTATCAGT TGCGGTTTGA CAATAAATAT TTGAACAGAC TATGGGATAT GACAGCACTG
ACACTGGCAG CACAGCTGTT TACGTTACCG GTATCACTTT ATTACTTTCA TCAGTTTCCT
TTGTATTTCC TGCCGGCTAA TATGATGGCA GTGCCTCTGT CAACAGTCGT ATTGTATGGA
GAGCTGTTAC TGTTAATCGT CGGACGTATA CCTGCTATCG CCGTTATGGT GGGTTCTTTG
CTGAAAATGA TCATGCAGCT GATGAACACA CTGGTTAATC AGATCGGTCA TTTGCCAGGC
GCCCTGATGG CAGATACGCA ACTACCTTTA TTCAGTGTAT TATGTCTATA TGCCTGTATC
GGCGGACTGC TCCTTTGGAT GATGCACCAA TGGAAGCCGG GGCTGTATGT ATTGCTGCTT
GCGATGACCA GCTGGAGTGT AGGAAGCATG TTCCTTCGCC TGAATGAACA ACATCAGCGG
AAAATGGTTG TTTATAACAT ACCCGGGCAT ACCGTGGTGG ATATGGTGAG CGGACGCCGC
GCATGGCGTT TGACCGGAAA GGGAATTACG GATACTGTAT ACGACCGTTA TCTGCGACCG
GCATATGTTT ATTATGGTAT CGGGGAAATC GCCGGAACCT GTGCTGAGGA GTCTCTTTTT
CCTGGGTTCA GGGTGCTGGT TGCCGGCAAT AAGCGGCTGG TAATCGTGGA TAGTATACTG
CCGAAGAGAT ATCCGGAGAA AAAGTTGCGG ACAGATTATC TTTTACTTTC ACATAATCCG
CATGTGGATA TCAAACAATT GGAAAAGATA TTTGACGCAG CCTATTACAT TTTTGACGCT
TCTAACTCCC TGCGGAACAT TCAACGGTGG AAAAGTGATT GTTACGTGCT AACTTTGCGC
TTCTTTTCGG TTCCGGATCA GGGAGCCTAT GTTGTAAATT TCTAA
 
Protein sequence
MFVSFLKGAP FLRLIIGVSA GIFIQIFLSL NVPMILAVMA FAGVLLFVSA RLPLVVRYRY 
DWWRGIALQC LVAGSGCLLV VLSDVRYHGY YFENSVQAGD LLQVRLEEPV QAKKKTFKTI
AQVRYVVRGN MRIPAKGRLL VYLQIDSNAR RLRQGDQLLI KNNSVPVSRS GNPGAFDHRS
YCEWQQIYRQ VYLQQDAWHL LQEREESSIQ RWLHVSRGYC LQTLQQYIGG REAALAAALL
IGYRYDLDPE MVQDYTNTGI VHIIAISGMH LALIYGALLW LLRWWPAQRF ADMLKGILII
VLLWAFTLLT GGAASVLRAT VMFTFLTLGK FLLQRHTNVY NTLAASAFLL LCYEPRLLLD
VGFQLSYLAV LSIVVAYRRL YYQLRFDNKY LNRLWDMTAL TLAAQLFTLP VSLYYFHQFP
LYFLPANMMA VPLSTVVLYG ELLLLIVGRI PAIAVMVGSL LKMIMQLMNT LVNQIGHLPG
ALMADTQLPL FSVLCLYACI GGLLLWMMHQ WKPGLYVLLL AMTSWSVGSM FLRLNEQHQR
KMVVYNIPGH TVVDMVSGRR AWRLTGKGIT DTVYDRYLRP AYVYYGIGEI AGTCAEESLF
PGFRVLVAGN KRLVIVDSIL PKRYPEKKLR TDYLLLSHNP HVDIKQLEKI FDAAYYIFDA
SNSLRNIQRW KSDCYVLTLR FFSVPDQGAY VVNF