Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0927 |
Symbol | |
ID | 8357041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1109102 |
End bp | 1111186 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963081 |
Product | ComEC/Rec2-related protein |
Protein accession | YP_003120626 |
Protein GI | 256419973 |
COG category | [R] General function prediction only |
COG ID | [COG0658] Predicted membrane metal-binding protein |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTTA GCTTTCTGAA AGGTGCGCCA TTTCTGCGCC TGATAATAGG TGTATCCGCA GGCATATTTA TACAAATATT TCTGTCATTA AATGTCCCGA TGATATTAGC TGTAATGGCT TTTGCGGGCG TGTTGTTGTT TGTTTCAGCA AGACTGCCAC TGGTAGTACG ATATCGGTAT GACTGGTGGC GGGGCATTGC CTTACAATGC CTGGTTGCCG GTAGTGGATG TTTGCTGGTC GTGTTGTCAG ATGTGCGTTA TCACGGTTAT TATTTTGAAA ACAGTGTTCA AGCCGGAGAT CTGCTGCAGG TAAGGCTGGA GGAGCCGGTG CAGGCAAAGA AAAAGACGTT TAAAACGATC GCTCAGGTAC GATATGTTGT ACGTGGCAAC ATGCGTATAC CTGCAAAGGG GCGTTTACTG GTTTATTTAC AGATCGACAG TAATGCCCGT CGATTGCGAC AGGGAGATCA GTTATTGATA AAGAATAACA GTGTCCCTGT ATCGCGTAGT GGTAATCCGG GTGCATTTGA TCACCGGAGT TATTGTGAAT GGCAGCAGAT TTACCGGCAG GTGTATCTGC AACAGGATGC CTGGCATTTG TTGCAGGAAA GAGAGGAATC TTCTATACAA AGGTGGCTGC ATGTAAGTCG CGGGTATTGT TTACAAACCT TGCAGCAGTA TATCGGTGGG CGCGAAGCTG CATTAGCGGC GGCTTTGCTG ATAGGATACC GCTATGATCT GGATCCGGAG ATGGTACAGG ATTATACGAA TACGGGTATC GTTCATATTA TCGCTATTTC GGGTATGCAC CTGGCGCTGA TATATGGCGC TTTGTTATGG TTGTTGCGCT GGTGGCCTGC GCAGCGTTTC GCCGACATGC TGAAAGGAAT ATTGATTATT GTATTGCTGT GGGCATTTAC ACTGTTGACG GGAGGAGCGG CCTCTGTCTT ACGTGCGACC GTGATGTTTA CTTTTCTGAC ACTGGGGAAG TTTTTGCTGC AACGGCATAC GAATGTATAT AATACCCTGG CGGCATCCGC ATTCCTGTTA TTGTGTTATG AACCCAGGTT ATTGCTGGAT GTAGGTTTTC AGCTGTCGTA CCTGGCAGTA CTGAGTATTG TAGTGGCTTA CCGCCGCTTA TATTATCAGT TGCGGTTTGA CAATAAATAT TTGAACAGAC TATGGGATAT GACAGCACTG ACACTGGCAG CACAGCTGTT TACGTTACCG GTATCACTTT ATTACTTTCA TCAGTTTCCT TTGTATTTCC TGCCGGCTAA TATGATGGCA GTGCCTCTGT CAACAGTCGT ATTGTATGGA GAGCTGTTAC TGTTAATCGT CGGACGTATA CCTGCTATCG CCGTTATGGT GGGTTCTTTG CTGAAAATGA TCATGCAGCT GATGAACACA CTGGTTAATC AGATCGGTCA TTTGCCAGGC GCCCTGATGG CAGATACGCA ACTACCTTTA TTCAGTGTAT TATGTCTATA TGCCTGTATC GGCGGACTGC TCCTTTGGAT GATGCACCAA TGGAAGCCGG GGCTGTATGT ATTGCTGCTT GCGATGACCA GCTGGAGTGT AGGAAGCATG TTCCTTCGCC TGAATGAACA ACATCAGCGG AAAATGGTTG TTTATAACAT ACCCGGGCAT ACCGTGGTGG ATATGGTGAG CGGACGCCGC GCATGGCGTT TGACCGGAAA GGGAATTACG GATACTGTAT ACGACCGTTA TCTGCGACCG GCATATGTTT ATTATGGTAT CGGGGAAATC GCCGGAACCT GTGCTGAGGA GTCTCTTTTT CCTGGGTTCA GGGTGCTGGT TGCCGGCAAT AAGCGGCTGG TAATCGTGGA TAGTATACTG CCGAAGAGAT ATCCGGAGAA AAAGTTGCGG ACAGATTATC TTTTACTTTC ACATAATCCG CATGTGGATA TCAAACAATT GGAAAAGATA TTTGACGCAG CCTATTACAT TTTTGACGCT TCTAACTCCC TGCGGAACAT TCAACGGTGG AAAAGTGATT GTTACGTGCT AACTTTGCGC TTCTTTTCGG TTCCGGATCA GGGAGCCTAT GTTGTAAATT TCTAA
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Protein sequence | MFVSFLKGAP FLRLIIGVSA GIFIQIFLSL NVPMILAVMA FAGVLLFVSA RLPLVVRYRY DWWRGIALQC LVAGSGCLLV VLSDVRYHGY YFENSVQAGD LLQVRLEEPV QAKKKTFKTI AQVRYVVRGN MRIPAKGRLL VYLQIDSNAR RLRQGDQLLI KNNSVPVSRS GNPGAFDHRS YCEWQQIYRQ VYLQQDAWHL LQEREESSIQ RWLHVSRGYC LQTLQQYIGG REAALAAALL IGYRYDLDPE MVQDYTNTGI VHIIAISGMH LALIYGALLW LLRWWPAQRF ADMLKGILII VLLWAFTLLT GGAASVLRAT VMFTFLTLGK FLLQRHTNVY NTLAASAFLL LCYEPRLLLD VGFQLSYLAV LSIVVAYRRL YYQLRFDNKY LNRLWDMTAL TLAAQLFTLP VSLYYFHQFP LYFLPANMMA VPLSTVVLYG ELLLLIVGRI PAIAVMVGSL LKMIMQLMNT LVNQIGHLPG ALMADTQLPL FSVLCLYACI GGLLLWMMHQ WKPGLYVLLL AMTSWSVGSM FLRLNEQHQR KMVVYNIPGH TVVDMVSGRR AWRLTGKGIT DTVYDRYLRP AYVYYGIGEI AGTCAEESLF PGFRVLVAGN KRLVIVDSIL PKRYPEKKLR TDYLLLSHNP HVDIKQLEKI FDAAYYIFDA SNSLRNIQRW KSDCYVLTLR FFSVPDQGAY VVNF
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