| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0925 |
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| Symbol | carB |
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| ID | 8357039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1102163 |
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| End bp | 1104982 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963079 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_003120624 |
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| Protein GI | 256419971 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.49458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAG ATTCCTCTAT CAAATCTGTT CTTATTATTG GTTCTGGTCC TATTATTATT
GGTCAGGCTT GTGAATTTGA CTATTCCGGC TCCCAGGCAG CACGTTCGCT GCGTGAGGAA
GGTATCAGGG TAGTATTGAT CAATTCCAAC CCGGCTACTA TCATGACTGA CCCTATGATG
GCCGACAAGG TGTACCTGTT GCCGCTGACA GTAGAAAGTA TAGAACAGAT ACTGGAGGAG
CAACAGATCG ATGCCGTACT GCCTACCATG GGTGGCCAGA CAGCATTGAA CCTCTGTAAA
GAGGTGGACG AGCTGGGTAT ATGGGAGAAG TTCAATGTCC GCCTGATAGG TGTTGATATC
AAAGCCATCG ATAAGGCAGA AGACCGTGAA CAGTTCCGCC AGTGGATGAT CCGGCTGGGC
GTACCGGTAG CACCGGCTAA AACTGCAAAC TCATTCCTGG AAGGAAAGGA ATTTGCACAG
GAAATCGGAT TCCCATTAGT TATCCGTCCT TCCTTCACCC TGGGTGGTAC CGGTGGTGGT
TTCGTACACA GCAAAGAAGA TCTGGATGAA GCACTGCAAC GTGGTTTACA GGCTTCTCCG
ATTCACGAAG TACTGGTTGA AAAAGCAGTA CTGGGTTGGA AAGAATTTGA GCTGGAGCTG
CTGCGCGACA AAAATGACAA CGTGGTGATC ATCTGTACCG TGGAAAACCT CGATCCAATG
GGGGTTCACA CCGGAGACTC CATTACCGTT GCACCTGCCA TGACACTGAG CGATACCGCT
TTCCAGGACA TGCGTAACAA AGCGATCATG ATGATGCGTG ACCTCGGTAA CTTTGCCGGT
GGTTGTAACG TACAGTTCTC GCTGAATCCT GAAAATGAAG AACTGATCGC GATCGAGATC
AACCCTCGTG TGAGCCGTTC CTCCGCACTG GCATCTAAAG CAACTGGTTA TCCAATTGCC
AAGATCGCTG CGAAACTGGC GATCGGTTAT AGCCTGGATG AACTGGAAAA CCAGATCACC
AGAACCACTT CTGCTTTTTT TGAACCAGCA CTGGACTACG TGATCGTAAA AATGCCACGC
TGGAACTTCG ATAAATTTAA AGGTGCTGAT CAGACCCTGG GTCTTCAGAT GAAGTCAGTA
GGTGAGGTAA TGGCTATCGG CCGTACGTTC ACTGAAGCTT TACAGAAAGC CTGTCAGAGT
CTGGAAAATG ATGCACTGGG TCTCGGTTAC TATGGTAAAT CAGCAATGAA GAGCGATCAG
CTCCTCGAAA GACTGAAGAC GCCGACCTGG GATCGTATCT TCCGTATTAA AGACGCCCTG
ATGGAAGGTG TTTCTGTGAA ACACATCCAC CAGATGACTT ATATCGACAA GTGGTTCCTG
AACCAGATCA ACGATATCGT GAACATGGAA AAGCAGCTGG CTGAACACGA TCTGGAATCA
GTAACAAAAG ACATGCTGAG CGACGCCAAA AGAATGGGCT TCTCTGATAT GCAGCTGGTT
CACCTGTTTG GTAACTGTGA AGAGAAGGAA GTTTACGAAA AACGTAAATC CCTGGGTATT
ACCCGTACCT ATAAAATGGT AGATACCTGT GCTGCTGAAT TTGAAGCAGT AACTCCTTAC
TTTTACTCCA CATTCGATAC CGTCAACGAA AGCAAACCTT CTGATAAAGG AAAAGTGATC
GTATTGGGTT CCGGTCCTAA CCGTATCGGT CAGGGTATCG AGTTTGACTA CTGTTGTACA
CACGGCTTAC AGGCCATCCA GGAATGCGGC TATGACGCGA TCATGGTGAA CTGTAACCCT
GAGACCGTAT CTACTGACTT CGACATGGCT AACAAGCTGT ACTTCGAGCC GGTATTCTGG
GAGCATCTGT GGGAAATCAT CGAACTGGAA AAACCGGTAG GTGTGATCGT ACAGCTGGGT
GGACAAACAG CATTGAAACT GGCTAAACGC CTGGAAGAAA ATGGTATCAG AATCATCGGT
ACATCCTTCG ATAACATGGA TATCGCCGAA GACCGTGGCC GCTTCTCCGA GCTGCTGGAA
GACCTGAAAA TTCCTTTCCC TAAATATGGT ACTGCATACA ACACTGACGA CGCGATCGAA
GTGGCCAAAG AAGTAGGTTA TCCTGTACTG GTGCGCCCTT CTTACGTACT CGGTGGTCAG
CGTATGCGTA TCGTGATCAA CGAAGAGGAA CTGGAAAGCT CCGTACTGAG CCTGCTGAAA
CACCTGCCAG GTAACAAGAT CCTGATCGAC CACTTCCTGG ATCGTTGTCA GGAAGCAGAG
ATCGACGGTA TCTTTGACGG TGAGAATTTC CATGTAATGG GCGTGATGGA GCACATCGAG
CCTGCGGGTA TCCATAGTGG CGACAGTAAC GCGGTGCTGC CAGCGTTTAA CCTGAGCCCG
ATGGAAGTAA CCACAATGGA ATACTACGCT GAGAAGATCG CCCGTGCGCT GGACATCCGT
GGCCTGATCA ACATCCAGTT TGCCATCAAA GGCGGACAGG TATTCGTGAT CGAAGCAAAC
CCACGTGCTT CCCGTACGAC GCCGTTCATC GCGAAAGCAT ACCAGGTACC TTACCTGAAC
ATCGCTACCA AAGTGATGCT GGGTGCGAAC AAACTCACTG ATTTCAAGAT CGAGAAGAAA
CTCAAAGGTT TTGCGATCAA AGAACCAGTA TTTTCCTTCA ACAAATTCCC GGGCGTGAAC
AAAGAACTCG GCCCTGAAAT GAAATCTACC GGTGAAGCGA TCCGTTTCAT CAAAGATCTC
AGGGACCCTT ATTTCAGGAC CCTGTACAAG GAGAAGAGCA TGTACCTGAG CAACAAGTAA
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| Protein sequence | MPKDSSIKSV LIIGSGPIII GQACEFDYSG SQAARSLREE GIRVVLINSN PATIMTDPMM
ADKVYLLPLT VESIEQILEE QQIDAVLPTM GGQTALNLCK EVDELGIWEK FNVRLIGVDI
KAIDKAEDRE QFRQWMIRLG VPVAPAKTAN SFLEGKEFAQ EIGFPLVIRP SFTLGGTGGG
FVHSKEDLDE ALQRGLQASP IHEVLVEKAV LGWKEFELEL LRDKNDNVVI ICTVENLDPM
GVHTGDSITV APAMTLSDTA FQDMRNKAIM MMRDLGNFAG GCNVQFSLNP ENEELIAIEI
NPRVSRSSAL ASKATGYPIA KIAAKLAIGY SLDELENQIT RTTSAFFEPA LDYVIVKMPR
WNFDKFKGAD QTLGLQMKSV GEVMAIGRTF TEALQKACQS LENDALGLGY YGKSAMKSDQ
LLERLKTPTW DRIFRIKDAL MEGVSVKHIH QMTYIDKWFL NQINDIVNME KQLAEHDLES
VTKDMLSDAK RMGFSDMQLV HLFGNCEEKE VYEKRKSLGI TRTYKMVDTC AAEFEAVTPY
FYSTFDTVNE SKPSDKGKVI VLGSGPNRIG QGIEFDYCCT HGLQAIQECG YDAIMVNCNP
ETVSTDFDMA NKLYFEPVFW EHLWEIIELE KPVGVIVQLG GQTALKLAKR LEENGIRIIG
TSFDNMDIAE DRGRFSELLE DLKIPFPKYG TAYNTDDAIE VAKEVGYPVL VRPSYVLGGQ
RMRIVINEEE LESSVLSLLK HLPGNKILID HFLDRCQEAE IDGIFDGENF HVMGVMEHIE
PAGIHSGDSN AVLPAFNLSP MEVTTMEYYA EKIARALDIR GLINIQFAIK GGQVFVIEAN
PRASRTTPFI AKAYQVPYLN IATKVMLGAN KLTDFKIEKK LKGFAIKEPV FSFNKFPGVN
KELGPEMKST GEAIRFIKDL RDPYFRTLYK EKSMYLSNK
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