| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0915 |
|---|
| Symbol | |
|---|
| ID | 8357029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1090981 |
|---|
| End bp | 1091925 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644963069 |
|---|
| Product | Lysophospholipase-like protein |
|---|
| Protein accession | YP_003120614 |
|---|
| Protein GI | 256419961 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.452127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC TGAAACGTAC CCTGCGCGTA GTCCTTGTTT TGTTTCTCCT GCTGAATGTC
GTTGCCGCAT TTCATGCCTG GAAATTCACT CACTTTTATG CTGCCGGCAC ATTCGCCAAT
AAACATCAGC AACCGGAACA AATGAGCGTC TTCGAAAAAG CGAAGATGGT GCTGTTGGGT
GTACGTTTGT CAAAGTCGGC TATCCGGCAC ACGCCGGAAG TGCCTTATGA AACAATGCAC
CTGCAAACAT CCAACGGTCT TGAACTGGAA GGATGGTGGA TGCCCCGGCC GGACGCAAAA
GGTACAGTGA TACTCTTTCA TGGTTACAAT GGCGGTAAAG ACGGTCCGAT TCCTGAAGCC
GCTTATTTCC GCCAGCTTGG CTACAATACA CTGCTGATGG ATTTTCGGGC GCACGGCAAT
AGCCAGGGAG ATGTTTGTAC GATCGGTTAC AAAGAAGCGG AAGATGTCAT GCTGGCATAC
AACTTCGTAC AGCAGAAAGG AGAAAAACAT ATTATTCTCT GGGGCGTAAG TATGGGCGCT
GCGGCTATTC TGAGGGCTGT TCCTACCTAT CACCTGTACC CCGACAAGGT AATCCTCGAA
TGCTCCTTTG CAAGGCTGAC AGATGCCGTT AAAGGAAGAA TGCGCGCCGT TAGTTTACCT
CCCACTCCAC TGGCAGAAAT ACTCACATTC TGGGGCGGTG TGGAGAATGG ATTCTGGGGC
TTCAGTCATA ACCCTGCCGA ATATGCCAAA AGCATCAATA TGCCGGCACT GGTTTGCTGG
GGTACAAAGG ATAACCGTGT AACGCGTCAG GAAACCAACA GCGTATACCG TCAGCTGGGC
ACACGCAAAA AGAAGCTGAT CATCTTTGAA GCATCGGGCC ATCAGTCATT CTGCCGTAAT
GAAGGAGAGA AATGGAAAAC AGCTGTTAAA AGCTTCCTGC AATAG
|
|---|
| Protein sequence | MKFLKRTLRV VLVLFLLLNV VAAFHAWKFT HFYAAGTFAN KHQQPEQMSV FEKAKMVLLG
VRLSKSAIRH TPEVPYETMH LQTSNGLELE GWWMPRPDAK GTVILFHGYN GGKDGPIPEA
AYFRQLGYNT LLMDFRAHGN SQGDVCTIGY KEAEDVMLAY NFVQQKGEKH IILWGVSMGA
AAILRAVPTY HLYPDKVILE CSFARLTDAV KGRMRAVSLP PTPLAEILTF WGGVENGFWG
FSHNPAEYAK SINMPALVCW GTKDNRVTRQ ETNSVYRQLG TRKKKLIIFE ASGHQSFCRN
EGEKWKTAVK SFLQ
|
|---|
| |