Gene Cpin_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0907 
Symbol 
ID8357021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1081601 
End bp1082404 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content46% 
IMG OID644963061 
ProductBeta-lactamase 
Protein accessionYP_003120606 
Protein GI256419953 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.175545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA CTGGCTGGAT ACTCCTGCTG ATAGCCTTCT TGGCCAATGC CTGCGCACCG 
AATAACGTTG AAAACGAAAA GAGCTGGGAA AAATACTTCG CCGAATACAA GGTAGAAGGA
TGTTTTATGC TGTTCAACAA CAGCCAGGGT ACCTTTAAAG TATATAACCT GGAACGTTCT
CAGCAACGCT TCCTGCCCGC CTCTACTTTT AAGATCTTCA ACTCCCTAGT AGGCCTTGAA
ACAGGTGTTA TCAAAGATAC TTCCTTCGTT ATTCCCTGGG ATGGCGTAAC ACGCGACATG
CCGGAATGGA ACCATGACCT GAGTATGCAA CAGGCCTTCC GCGTATCTGC TGTGCCTTAC
TTCCAGGAAG TAGCCCGCCG TATCACCAAA CCAGTAATGC AGCACTGGCT GGATACTGTC
AAGTTTGGTA ATATGAAGAT CAGCAAGATC GATACCTTCT GGCTGGATAA CTCTTTACAG
ATCTCTCCGG ATGAAGAACT TGGCTTCGTC AAGAAACTGT ATTTCGACCA GCTGCCTTTC
CATAAAGTGA CCATGCAGAA CGTCAGACAA GTAATGCTCA TGGAGAAAAA ACCAGAATAT
GAACTGAGTT ATAAAACAGG TATGGGTTTC TCCGGACCTA AAACAATCGG CTGGATTACC
GGCTGGATTG AAGAGAATGG CCACCCCAGC TTCTTTGTAC TGAACATTGA AACAGAAAAC
AAATCGCTGG ATATGCGCAC GGTGCGTATG AACATCCTCA GAAACCTCCT GACAGACGCC
GGTTACTTTA AAGGAATGAA ATAG
 
Protein sequence
MKQTGWILLL IAFLANACAP NNVENEKSWE KYFAEYKVEG CFMLFNNSQG TFKVYNLERS 
QQRFLPASTF KIFNSLVGLE TGVIKDTSFV IPWDGVTRDM PEWNHDLSMQ QAFRVSAVPY
FQEVARRITK PVMQHWLDTV KFGNMKISKI DTFWLDNSLQ ISPDEELGFV KKLYFDQLPF
HKVTMQNVRQ VMLMEKKPEY ELSYKTGMGF SGPKTIGWIT GWIEENGHPS FFVLNIETEN
KSLDMRTVRM NILRNLLTDA GYFKGMK