Gene Cpin_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0906 
Symbol 
ID8357020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1080035 
End bp1081072 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content47% 
IMG OID644963060 
Productvon Willebrand factor type A 
Protein accessionYP_003120605 
Protein GI256419952 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.519509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTAC GTTTTCAACA CAGCGAATAT TTATGGGCAC TGGTATTACT GCTGGTATTG 
CAACTTGCAT TCCTCAGTAT ATCCTGGTGG AAACGACGTT CTATTCGGAA ACTCGGTGAC
CCTGTTCTTG TAGAGAAATT ATTCACCGGT TATTCCCGTC GTCGGTTCAC TTTCCGCTTC
CTCCTGATCT TTATCGCCTT CCTCTTTGGC GCTATCGGAC TGGCTAACCT CCAGAAAGGC
AGCCGTATGG AAAAGATCAC CCGTAAGGGC GTGGATGTTG TAATCGCACT CGACGTGAGT
AAAAGTATGC TGGCTGGCGA CGTAAAACCT GACCGTCTTA CCCGTGCAAA ACAGCTGATA
TCCAAACTGG CTGATAAACT GGATAATGAC CGTGTCGGAC TGGTCGTATT TGCGGGCAAT
GCTTACCTGC AGATGCCTCT GACCATCGAT TACTCCGCCG CTAAAATGTA CCTGACTACC
GTAAGTCCCG ATATGATCCC CACTCAGGGT ACCGCGATCG GTCAGGCCAT ACAGGTAGCC
AATGACGCCT TCAATAAAAA AGAAAGAAAA CATAAGTCCC TTATTATCAT CTCTGACGGT
GAAGACCATG ACGAAGCCGC TATCTCAAAA GCACGTGCTG CTTTCGAAGA CGGTGTAGTG
ATCAATACCA TCGGTATTGG TTCCCCGACC GGTTCCCCAC TGCCGGATCC TGAAACGGGT
ACTTATAAAA AAGATAAAGA AGGGAATACC GTTATATCAA AACTGAACGA AGATGCACTG
AAGTCCATCG CAGCTGCCGG CAAAGGCATC TACGAACACC TGGACAATAA CACAGAAGAG
GTGGTCAATT CACTGACACA GAAGATCGAC AGCATGGAGC AGAAAGAGTT CGGAGAAAAC
ATCTTTACAG ACTACAACAG CTACTTCCAG TATTTCCTGG CCATCAGCCT CCTGCTGCTC
GTTGCTGAAT TCTTTATTCC TGAAATCAGA CGCAGCAAAC GCGCTGACGT TGTTGTTACC
GCTACAGAAA AACCATGA
 
Protein sequence
MMLRFQHSEY LWALVLLLVL QLAFLSISWW KRRSIRKLGD PVLVEKLFTG YSRRRFTFRF 
LLIFIAFLFG AIGLANLQKG SRMEKITRKG VDVVIALDVS KSMLAGDVKP DRLTRAKQLI
SKLADKLDND RVGLVVFAGN AYLQMPLTID YSAAKMYLTT VSPDMIPTQG TAIGQAIQVA
NDAFNKKERK HKSLIIISDG EDHDEAAISK ARAAFEDGVV INTIGIGSPT GSPLPDPETG
TYKKDKEGNT VISKLNEDAL KSIAAAGKGI YEHLDNNTEE VVNSLTQKID SMEQKEFGEN
IFTDYNSYFQ YFLAISLLLL VAEFFIPEIR RSKRADVVVT ATEKP