Gene Cpin_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0894 
SymbolrecR 
ID8357008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1067113 
End bp1067730 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID644963048 
Productrecombination protein RecR 
Protein accessionYP_003120593 
Protein GI256419940 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTTT CCTCCGCACT GATAGAAAAT GCAGTTAATG AGTTTGCGCG GCTACCGGGC 
ATTGGCAAGA AAACCGCCTT ACGCCTGGTT CTACACCTGC TCAAACAGGA TCCTGCGCAG
GTAAAACTGT TTGGTGAAGT AGTCACCCGT ATGCGGGAAC AGATCAAATT CTGTAAAGTA
TGCCACAACG TTTCCGACCA GGAAGTATGT AGTATATGCA GCAGTCCATC CCGCAACAAA
GCACTGGTCT GCGTCGTAGA AAACATCCGT GACGTAATGG CCATAGAAAA TACACAACAG
TTCAATGGCG TATACCATGT ACTCGGCGGC ATCATCTCTC CTATCGATGG TATCGGTCCG
GAGCAACTGA ATATCTATTC ACTGGTAGAC AGGGTACAGC AACAGGGGAT TGATGAAATC
ATCATGGCGC TCAGCCCTAC CATTGAAGGC GATACGACTA TCTACTATCT GTCTAAAAAG
CTAAAGGAAT TCCCTTGTAA AATCACTACG ATCGCCCGTG GTATTGCTTT TGGCGGCGAA
CTTGAATACG CGGATGAAAT GACCCTGGCA AGATCCATTT CCAACAGGCT TCCGCTGGAA
AGTTATGTGC AGAAATAA
 
Protein sequence
MIFSSALIEN AVNEFARLPG IGKKTALRLV LHLLKQDPAQ VKLFGEVVTR MREQIKFCKV 
CHNVSDQEVC SICSSPSRNK ALVCVVENIR DVMAIENTQQ FNGVYHVLGG IISPIDGIGP
EQLNIYSLVD RVQQQGIDEI IMALSPTIEG DTTIYYLSKK LKEFPCKITT IARGIAFGGE
LEYADEMTLA RSISNRLPLE SYVQK