Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0894 |
Symbol | recR |
ID | 8357008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1067113 |
End bp | 1067730 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963048 |
Product | recombination protein RecR |
Protein accession | YP_003120593 |
Protein GI | 256419940 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTTT CCTCCGCACT GATAGAAAAT GCAGTTAATG AGTTTGCGCG GCTACCGGGC ATTGGCAAGA AAACCGCCTT ACGCCTGGTT CTACACCTGC TCAAACAGGA TCCTGCGCAG GTAAAACTGT TTGGTGAAGT AGTCACCCGT ATGCGGGAAC AGATCAAATT CTGTAAAGTA TGCCACAACG TTTCCGACCA GGAAGTATGT AGTATATGCA GCAGTCCATC CCGCAACAAA GCACTGGTCT GCGTCGTAGA AAACATCCGT GACGTAATGG CCATAGAAAA TACACAACAG TTCAATGGCG TATACCATGT ACTCGGCGGC ATCATCTCTC CTATCGATGG TATCGGTCCG GAGCAACTGA ATATCTATTC ACTGGTAGAC AGGGTACAGC AACAGGGGAT TGATGAAATC ATCATGGCGC TCAGCCCTAC CATTGAAGGC GATACGACTA TCTACTATCT GTCTAAAAAG CTAAAGGAAT TCCCTTGTAA AATCACTACG ATCGCCCGTG GTATTGCTTT TGGCGGCGAA CTTGAATACG CGGATGAAAT GACCCTGGCA AGATCCATTT CCAACAGGCT TCCGCTGGAA AGTTATGTGC AGAAATAA
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Protein sequence | MIFSSALIEN AVNEFARLPG IGKKTALRLV LHLLKQDPAQ VKLFGEVVTR MREQIKFCKV CHNVSDQEVC SICSSPSRNK ALVCVVENIR DVMAIENTQQ FNGVYHVLGG IISPIDGIGP EQLNIYSLVD RVQQQGIDEI IMALSPTIEG DTTIYYLSKK LKEFPCKITT IARGIAFGGE LEYADEMTLA RSISNRLPLE SYVQK
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