| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0878 |
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| Symbol | |
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| ID | 8356992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1050999 |
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| End bp | 1052372 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963032 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_003120577 |
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| Protein GI | 256419924 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA AAACTGCTTT CTTCTGTCAG AATTGTGGAT ATGAATCAGC TAAGTGGACT
GGTAAATGTC CGAGTTGTGG TCAATGGAAT ACTTTCGTTG AAGAGAAAGT ACAAAAAGAT
ATCCCTCTAC GTAATGCCGG ATGGCAACCT GAAAAAGAAC ACGGCGCCAA ATCAGATAAT
ATCGTAAACC TTTCCGAGAT CAGCGGTACC GAAGAAGAAA GACTACTCAC ACCAGATGCA
GAACTGAACC GTGTATTAGG CGGCGGTATA GTACCCGGCT CACTGGTACT CGTAGGTGGT
GAACCTGGTA TCGGAAAAAG TACCCTGTTC CTGCAGAATG CATTACTACT CAAAGACATC
ACTACATTAT ATATAAGTGG AGAAGAAAGT GCACAGCAGA TAAAAATGAG AGCAGACAGA
TTACAGGTAA AAAATGATCT CTTCTATCTG CTCACAGAAA CATCTACACA AACAATCTTC
CAGGAGATAA AAAAACTGCG TCCGCAACTC GTTATCGTTG ACTCTATTCA GACGCTGCAA
TCTCCTTTTA TAGAATCAGC TCCCGGCAGC GTATCCCAGA TCAGGGAAAC AACCGCCGAA
CTGCAACGCT TCGCAAAAGA AAGTCATACC CCCGTATTCC TGATCGGCCA TATCACCAAA
GATGGTTCCA TTGCCGGTCC GAAAATACTG GAACATATGG TTGACACCGT TCTCCAGTTT
GAAGGTGATC AACACTATGC ATACCGCATA CTTCGTACCA TTAAAAACCG CTTCGGCTCT
ACGGCGGAAC TGGGCATCTA TGAAATGACC GGCGGCGGAT TAAGACAGGT CACCAACCCT
TCAGAAATCC TGATCTCCCA AAGGGAAGAT CAGCTGAGCG GTGTCGCTAT CGCTGCGACA
ATAGAAGGTA TGCGTCCTAT GCTCGTAGAA GTACAGGCAC TCGTTACCCA ATCCGTCTAT
GGTACACCGC AACGTACCGC TACCGGATTT GACTTACGCC GTTTACAACT GCTGCTCGCC
GTACTCGAAA AACGCGGCGG CTTCCACTTC GGTGTCAAAG ACGTATTTCT CAATATCGCC
GGTGGTATCC GCGTAGAAGA TCCTTCTATT GATCTCGCCG TATTGTGCGC ATTATTATCC
TCTTATGAAG ACATCCCCAT CAGCAGTAAA ATCTGCTTCG CCGGTGAAGT CGGATTAAGT
GGTGAGATCC GTGCCGTAAA CCGTATAGAA CAACGTGTTG CAGAAGCAGA AAAACTGGGT
TTCGAAAAGA TCTTCATCAG TCGCTACAAT AAAAAAGGAA CAGATATCAG CAAGTTTAAC
ATTGAAGTGA TACCGGTAGG CAGAGTGGAT GAAGTATACC GCGGACTATT TTAA
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| Protein sequence | MKIKTAFFCQ NCGYESAKWT GKCPSCGQWN TFVEEKVQKD IPLRNAGWQP EKEHGAKSDN
IVNLSEISGT EEERLLTPDA ELNRVLGGGI VPGSLVLVGG EPGIGKSTLF LQNALLLKDI
TTLYISGEES AQQIKMRADR LQVKNDLFYL LTETSTQTIF QEIKKLRPQL VIVDSIQTLQ
SPFIESAPGS VSQIRETTAE LQRFAKESHT PVFLIGHITK DGSIAGPKIL EHMVDTVLQF
EGDQHYAYRI LRTIKNRFGS TAELGIYEMT GGGLRQVTNP SEILISQRED QLSGVAIAAT
IEGMRPMLVE VQALVTQSVY GTPQRTATGF DLRRLQLLLA VLEKRGGFHF GVKDVFLNIA
GGIRVEDPSI DLAVLCALLS SYEDIPISSK ICFAGEVGLS GEIRAVNRIE QRVAEAEKLG
FEKIFISRYN KKGTDISKFN IEVIPVGRVD EVYRGLF
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