Gene Cpin_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0873 
Symbol 
ID8356987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1045661 
End bp1046713 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content41% 
IMG OID644963027 
Producthypothetical protein 
Protein accessionYP_003120572 
Protein GI256419919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATG TTTCAGAATT TAAAGATTTA GCGTGTCTGT CCATTCACAA AGTGGGCAAT 
GCCTCGCAGG AAGAAGCACT GATATGCTCT CAGGAGCCGT TGGAACTGAA GGATGAAGCG
ATCAGTCAGC TGTTGTTAAC GTACTTCATA CAGCCGTTTA CAAACAGCGC GGAGTATTTT
CGTTTTTATC ATGAAGCGGA TCTGCAATTA AATGAGATTT TTCAATATTG CCGCCGTATC
TTTGAAAACA GGGACAATTT TCACGAGCAG TCAGTTAATA TTGCCAAACA TCTGTATAAG
CATTCCACTC ATCCGAAGAT CAAGGGAGGA GAATTATATA TAGCCTACTT TAGTAAATGT
CTTGTGGATG GAGAGGATGT CGAAGCAATA GGTATTTTTA AATCAGAGAG CAGAGACACC
TATCTGAAAG TATTCCTCGC CAACGATAAT TATCAGGTGG ATTATGAAGA CGGGATCAAT
ATCAACAAGC TTGATAAGGG ATGCCTGATC TTTAACACCG AAGAGGAGAA CGGGTACAAA
GTCAGCGTAG TAGATAGCAT TAGCAAACAG AATGAAGCAG TTTACTGGAA AGACGCTTTC
CTTCAGGTAC AACGCCGTGA GGACAGCTAT CACCAGACAG AACTTGCCGT GAACATGTGT
AAGAAGTTTA TCAATGATAA ACTCCCTGAT CAGTATGAGA TCAGCAGAGT AGATCAGGTA
GATCTTCTTA ACAAGTCAGC AACCTATTTT AAAGAGAAAG AGCAGTTTGA TCTGGACGAT
TTTGCACAAG AGGTACTGGG CAACCCCGAA GCTATTCAAT CCTTTAAGGA GTATAAACAG
ACGTTTCAGC AGGAATTCCA GCAGGAGTTC CCCGACGAAT TTGACATATC ATCGCCTGCA
GTAAAGAAGC AGCAGAAGGT GTTTAAGAGT GTAGTGAAGC TGGACCGGAA TTTTCATATT
TATATACATG GTGACAGAGA GATGATTGAG CGTGGTTTTG ACGAAGCGAC GAATCTCTAT
TACTATAAGC TCATGTTTGA GAACGAAACC TGA
 
Protein sequence
MIHVSEFKDL ACLSIHKVGN ASQEEALICS QEPLELKDEA ISQLLLTYFI QPFTNSAEYF 
RFYHEADLQL NEIFQYCRRI FENRDNFHEQ SVNIAKHLYK HSTHPKIKGG ELYIAYFSKC
LVDGEDVEAI GIFKSESRDT YLKVFLANDN YQVDYEDGIN INKLDKGCLI FNTEEENGYK
VSVVDSISKQ NEAVYWKDAF LQVQRREDSY HQTELAVNMC KKFINDKLPD QYEISRVDQV
DLLNKSATYF KEKEQFDLDD FAQEVLGNPE AIQSFKEYKQ TFQQEFQQEF PDEFDISSPA
VKKQQKVFKS VVKLDRNFHI YIHGDREMIE RGFDEATNLY YYKLMFENET