Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0868 |
Symbol | |
ID | 8356982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1039690 |
End bp | 1040454 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963022 |
Product | ABC transporter related |
Protein accession | YP_003120567 |
Protein GI | 256419914 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTAA AAATACATAC AGATCAGCTG GTAAAGCGTT ACGGTCACAG AACCGTAGCG AACCATGTAT CTGTAGAAGT GACACAAGGA GAGATCGTGG GTTTACTCGG ACCTAACGGC GCCGGTAAAA CAACCACATT CTACATGGTA GTGGGGCTTA TCAAGCCCGA TGAGGGACAG GTGTACCTGG ATGAGGTGAA TATCACTAAG CTGCCAATGT ATAAAAGGGC GAAGATGGGT ATCGGCTATC TGCCACAGGA GGCTTCGGTA TTCCGTAAGC TGAGTGTGGA GGATAACATA TCCGCCGTAC TGGAAATGAC CGGACTGAAA AAAGCAGAAC AGAAGGAAAA ACTGGAAAGT CTGCTGGAAG AGTTCCGTCT GACCCACGTA CGTAAGAGTC CCGGCGATGT ATTGAGCGGT GGTGAGCGCA GGCGTACCGA AATCGCCCGT GCACTCGCGG TGGACCCTAA GTTCATCCTG TTGGACGAGC CGTTTGCGGG TATCGATCCT ATTGCCGTGG AAGATATTCA GTCAATAGTT GCCCGTCTTA AATACAAGAA CATCGGGATC CTCATAACAG ACCATAACGT ACAGGAGACA CTTTCCATCA CAGACCGGGC ATACCTTCTT TTTGAAGGAA AGATCCTGAA AGCCGGTACC GCGGAAGAGT TGGCCGAAGA CGAACAGGTT AGAAAAGTGT ATCTTGGCCA GAATTTCATT TTACGTCGTA AAAATTACCT GGACGAAGCA GCTAAGAAAC AATAA
|
Protein sequence | MALKIHTDQL VKRYGHRTVA NHVSVEVTQG EIVGLLGPNG AGKTTTFYMV VGLIKPDEGQ VYLDEVNITK LPMYKRAKMG IGYLPQEASV FRKLSVEDNI SAVLEMTGLK KAEQKEKLES LLEEFRLTHV RKSPGDVLSG GERRRTEIAR ALAVDPKFIL LDEPFAGIDP IAVEDIQSIV ARLKYKNIGI LITDHNVQET LSITDRAYLL FEGKILKAGT AEELAEDEQV RKVYLGQNFI LRRKNYLDEA AKKQ
|
| |