Gene Cpin_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0863 
Symbol 
ID8356977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1034341 
End bp1035735 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content46% 
IMG OID644963017 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003120562 
Protein GI256419909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.883245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAC TGGTCTGCAT TTTATGCCAT TGGCAGCTGC AGGCCCAGGG CTACCAGCTC 
ACTTTTCAGT TAAAACAGTA TAAAGGGGGA CAGCTTGCGC TGGCCCATTA TATGGGAAAA
AGCTTCTACA TGGCTGATTC CGCCCAGATC AATGAGCAGG GTATCGCAAT TATGAAGAAT
AAGGAGGCTT TACCCGGCGG TATTTACATC GTATTACTGC CTGGCCGGCA ACGTTATTTC
GAAATGCTGC TGGATAACAA AGATCAGCAG TTCTCCATCT CCGTTGATAC TTCAGACCTG
ATCAACAAGA CCGTTTTCAA GACATCCCGG GAAAACGAAA TTTTCCAGTC ATATAACAAA
TTTCTCCAAA AGGAAGTATC CACCCAGGAT AAGCAGATCA ATGCCCTGCT GGCCAAGCAT
ACGGCCGCTG ACAGCGCTGC AGCAAGACCT TTACAGGTGG CATTGGGCAA AAGACTGCAG
GATTTCCGTA ACGGTGTGAT CGGAAAGTAT CCTCAAAGTC TGCTGACCAG CATTTTCAGG
GCAATGAAGG AACCGGAAGT ACCAGCTACG CCCGCAGGAG AGGATTCCAC CTTTGGTTAC
CGTTATTACA AAACACATTA CTGGGACAGC GTTAACCTGA ATGACGGCCG ACTGGTAAGA
ACAGATATTA TCGAGCGAAA ACTGAACAGG TATTTCACAC AGCTGGTTGC CATGGATCCT
GATTCCATCA TTGTGGAGGC AGATAAGGTG GTAGATAAGA CCAGGAAGGA TAAAGAGATG
TTTAAGTTTG TCGTATGGTG GCTGACCTAT ACGTACGAAA CTTCCAAGTA TATGGGCATG
GATGCTGTGT TTGTGCACAT GGTAGAGAAA TACTACGTAT CCGGTGAAGC ATACTGGCTG
AAAGATGATC AGCTGAACAA GATCATTTCC CGGGCCTATT CTATGGCGCC AAACCTGATA
GGACAGCAGG CGCCCCCACT GGAAGTAAAA GATACTGCGC TGCAGGCCAT ATCCCTTTAT
ACCACAAAAG CCAAATACAC AGTACTCGTT TTCTGGGATC CTACCTGTGG TCACTGTAAG
ATTGAACTAC CCCGCCTTGA CTCGGCATAT AATGCCAACT GGAAGAACAA GGGTGTAGCG
ATGATTGGTT TTAAGACAGA AGGTACCAAA GACGAGTGGC AGGGTTTTAT CAAAGAACAC
CACCTCACAG GATGGATCCA CGCATGGGAT CCTGATGCAC AAAGTAACTA CCGCCGTCTC
TACGACGTAT ATAGTACACC GGTAGTATAT CTGCTGGATG AAAAGAAGAA AATCCTGGCC
AAAAGACTGG GTGTAGAACA GCTCAATGAT TTTCTTGAAA AATTGGAATC AAAAGGTGGG
ACTGTTCACA AATAA
 
Protein sequence
MILLVCILCH WQLQAQGYQL TFQLKQYKGG QLALAHYMGK SFYMADSAQI NEQGIAIMKN 
KEALPGGIYI VLLPGRQRYF EMLLDNKDQQ FSISVDTSDL INKTVFKTSR ENEIFQSYNK
FLQKEVSTQD KQINALLAKH TAADSAAARP LQVALGKRLQ DFRNGVIGKY PQSLLTSIFR
AMKEPEVPAT PAGEDSTFGY RYYKTHYWDS VNLNDGRLVR TDIIERKLNR YFTQLVAMDP
DSIIVEADKV VDKTRKDKEM FKFVVWWLTY TYETSKYMGM DAVFVHMVEK YYVSGEAYWL
KDDQLNKIIS RAYSMAPNLI GQQAPPLEVK DTALQAISLY TTKAKYTVLV FWDPTCGHCK
IELPRLDSAY NANWKNKGVA MIGFKTEGTK DEWQGFIKEH HLTGWIHAWD PDAQSNYRRL
YDVYSTPVVY LLDEKKKILA KRLGVEQLND FLEKLESKGG TVHK