Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0863 |
Symbol | |
ID | 8356977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1034341 |
End bp | 1035735 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963017 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003120562 |
Protein GI | 256419909 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.883245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTAC TGGTCTGCAT TTTATGCCAT TGGCAGCTGC AGGCCCAGGG CTACCAGCTC ACTTTTCAGT TAAAACAGTA TAAAGGGGGA CAGCTTGCGC TGGCCCATTA TATGGGAAAA AGCTTCTACA TGGCTGATTC CGCCCAGATC AATGAGCAGG GTATCGCAAT TATGAAGAAT AAGGAGGCTT TACCCGGCGG TATTTACATC GTATTACTGC CTGGCCGGCA ACGTTATTTC GAAATGCTGC TGGATAACAA AGATCAGCAG TTCTCCATCT CCGTTGATAC TTCAGACCTG ATCAACAAGA CCGTTTTCAA GACATCCCGG GAAAACGAAA TTTTCCAGTC ATATAACAAA TTTCTCCAAA AGGAAGTATC CACCCAGGAT AAGCAGATCA ATGCCCTGCT GGCCAAGCAT ACGGCCGCTG ACAGCGCTGC AGCAAGACCT TTACAGGTGG CATTGGGCAA AAGACTGCAG GATTTCCGTA ACGGTGTGAT CGGAAAGTAT CCTCAAAGTC TGCTGACCAG CATTTTCAGG GCAATGAAGG AACCGGAAGT ACCAGCTACG CCCGCAGGAG AGGATTCCAC CTTTGGTTAC CGTTATTACA AAACACATTA CTGGGACAGC GTTAACCTGA ATGACGGCCG ACTGGTAAGA ACAGATATTA TCGAGCGAAA ACTGAACAGG TATTTCACAC AGCTGGTTGC CATGGATCCT GATTCCATCA TTGTGGAGGC AGATAAGGTG GTAGATAAGA CCAGGAAGGA TAAAGAGATG TTTAAGTTTG TCGTATGGTG GCTGACCTAT ACGTACGAAA CTTCCAAGTA TATGGGCATG GATGCTGTGT TTGTGCACAT GGTAGAGAAA TACTACGTAT CCGGTGAAGC ATACTGGCTG AAAGATGATC AGCTGAACAA GATCATTTCC CGGGCCTATT CTATGGCGCC AAACCTGATA GGACAGCAGG CGCCCCCACT GGAAGTAAAA GATACTGCGC TGCAGGCCAT ATCCCTTTAT ACCACAAAAG CCAAATACAC AGTACTCGTT TTCTGGGATC CTACCTGTGG TCACTGTAAG ATTGAACTAC CCCGCCTTGA CTCGGCATAT AATGCCAACT GGAAGAACAA GGGTGTAGCG ATGATTGGTT TTAAGACAGA AGGTACCAAA GACGAGTGGC AGGGTTTTAT CAAAGAACAC CACCTCACAG GATGGATCCA CGCATGGGAT CCTGATGCAC AAAGTAACTA CCGCCGTCTC TACGACGTAT ATAGTACACC GGTAGTATAT CTGCTGGATG AAAAGAAGAA AATCCTGGCC AAAAGACTGG GTGTAGAACA GCTCAATGAT TTTCTTGAAA AATTGGAATC AAAAGGTGGG ACTGTTCACA AATAA
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Protein sequence | MILLVCILCH WQLQAQGYQL TFQLKQYKGG QLALAHYMGK SFYMADSAQI NEQGIAIMKN KEALPGGIYI VLLPGRQRYF EMLLDNKDQQ FSISVDTSDL INKTVFKTSR ENEIFQSYNK FLQKEVSTQD KQINALLAKH TAADSAAARP LQVALGKRLQ DFRNGVIGKY PQSLLTSIFR AMKEPEVPAT PAGEDSTFGY RYYKTHYWDS VNLNDGRLVR TDIIERKLNR YFTQLVAMDP DSIIVEADKV VDKTRKDKEM FKFVVWWLTY TYETSKYMGM DAVFVHMVEK YYVSGEAYWL KDDQLNKIIS RAYSMAPNLI GQQAPPLEVK DTALQAISLY TTKAKYTVLV FWDPTCGHCK IELPRLDSAY NANWKNKGVA MIGFKTEGTK DEWQGFIKEH HLTGWIHAWD PDAQSNYRRL YDVYSTPVVY LLDEKKKILA KRLGVEQLND FLEKLESKGG TVHK
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