| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0861 |
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| Symbol | |
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| ID | 8356975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1031982 |
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| End bp | 1032815 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963015 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003120560 |
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| Protein GI | 256419907 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT TCAGGCCCGG TAGATTTGAA ATACTCCCTA CGGTGATCAA AAATCTTTTG
ATCATCAACG CATTAGTGTT CCTGGCACAG AGCACAATGG GAGAATTTTT AGGAAATCCG
AGATATATTG AAGATACTTT CGCACTGCAT TACTGGGGAT CCCGTCTTTT TAAGCCACAT
CAGCTGGTGA CGCACCTTTT TATGCATGGC TCCTTCGGTC ACCTGTTCAC AAACATGTTT
ACCCTGTGGA TGTTTGGCGC CACCCTGGAA AATATCTGGG GACCAAAACG CTTCCTGATA
TTTTATATGG TATGTGGCCT CGGAGCAGCG CTCTGTCACA TGGGTGTATT AACTTATGAA
AACGTACGGC TCGCCCACGA TGCCCGTGAA TTCATCAACA ATCCGACCCT GACCAACTTC
AGAATACTGG ACGACCGCTT TGACCTGGAT GCCGGCAACT TTGCCGCCGA AGGTATCAGA
ACGGCATTCT ATGCCGCACC TGATAACCCC GGGGTTATCG CCGATGCCAG GGCTTTCGTC
AGCCAGTTTG CGCAGATTTA CCCTAATGGC GCTACATTGG GTGCTTCAGG CGCCGTATTC
GGACTGCTGT TCGCATTTGG CTACCTGTTT CCGAATAATC TCATTTACCT TTACTTCCTG
TTCCCGCTGA AAGCGAAATA TTTCATCGGT ATTATCATCC TGATGGAACT GTTTTCGGGC
ATACAAAACT CGGCTGGTGA TAACGTTGCA CACTTTGCCC ACCTTGGAGG GGTAATATTC
AGTTATATCC TCCTGAAGAT CTGGAACAAA AAGAACCGTA GTCATTTTTA TTAA
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| Protein sequence | MSEFRPGRFE ILPTVIKNLL IINALVFLAQ STMGEFLGNP RYIEDTFALH YWGSRLFKPH
QLVTHLFMHG SFGHLFTNMF TLWMFGATLE NIWGPKRFLI FYMVCGLGAA LCHMGVLTYE
NVRLAHDARE FINNPTLTNF RILDDRFDLD AGNFAAEGIR TAFYAAPDNP GVIADARAFV
SQFAQIYPNG ATLGASGAVF GLLFAFGYLF PNNLIYLYFL FPLKAKYFIG IIILMELFSG
IQNSAGDNVA HFAHLGGVIF SYILLKIWNK KNRSHFY
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