Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0858 |
Symbol | |
ID | 8356972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1028848 |
End bp | 1029963 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963012 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003120557 |
Protein GI | 256419904 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGATTTC TGAGGTTATT CACAAAAGGA TTCTTTTTAA CGGCGAACAC CATTGTAGTG CTTCTGTTCA TAGTGGCCTG CCTGGCGCCG TATGTTTCAC CGGAACGTTG GTGGCCTATC AGTTTCATTA CATTGCTCTT CCCGTTACTG CTGCTGGTAT TGGTGTTATT CTTTATCTGC TGGCTGCTGT TCGATTTTAA ATATTGCCTG CTGCCAATGT TGCCGGTCGT AATAGGCTGG AAATCTATTT CCGCTTTTGT CGCATTCAAT TACCCGACTT CCGGAAAACA GTTTGCCAAT CCTGCGGGCA GTCTGACCAT CATGAGCTAC AACGTTGCTC AGTTCGGGCT TTACCGTGAG AAAGACAGCA AATACAACAG GGAAGCGATG TTTGCGCTGA TAAAAAAGCA GGAACTGGAT ATTGTTTGTC TGCAGGACTT TTATACTTCA GAAAAGAAAA ATGATTTCAA TAACCGGGAA GATATCTCCC GGGAGATGAA ACTACCCTAC CGTTTCTTTT CCAGTGATTT TAACCGGGAT GGTATGCAGC ACTGGGGATC TATTATCTAT TCCCGTTACC CGATTATCAA GTCTGACAAA CTGAAAATGT CATATGGTCC GCGTAGTGAA AGTCTTATCT ATGCCGACAT TGTGAAGAAC GGCGACACGA TCCGTATCAT CAATATGCAC CTGGCATCTT ACCGTTTCAA TGAAAGGGAC TATCGTTCTA TCGAAAAGAT AAAAAAGCAG GAAGATACCG GTCTGGTGGC TACACGCAAT ATTGTGCAGA AAATGCGCGA CGCGTATGTG GATCGCAGTA AACAGGCAGA TATTGTGTCA GCATTTATCA GTACCTGTCC ATATCCCGTG ATCCTATGCG GAGACTTTAA TGATACGCCG GCATCGTATA CTTATTTTAC CATCCGGGGC GACCTGCAGG ATGCTTTTCT CAGAAAGGGC AGCGGTATCG GCCGGACTTA CGCCGGACTG GCCCCTACCC TCCGGATCGA TTACATCTTT ACGGATAAAT CATTCAAAGT CAATTCATTC CGGAAAATCA ATTCTACCCT GTCCGATCAC TATCCGGTGA TAGCCAATGT AAGTGCCAGA CGGTAA
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Protein sequence | MRFLRLFTKG FFLTANTIVV LLFIVACLAP YVSPERWWPI SFITLLFPLL LLVLVLFFIC WLLFDFKYCL LPMLPVVIGW KSISAFVAFN YPTSGKQFAN PAGSLTIMSY NVAQFGLYRE KDSKYNREAM FALIKKQELD IVCLQDFYTS EKKNDFNNRE DISREMKLPY RFFSSDFNRD GMQHWGSIIY SRYPIIKSDK LKMSYGPRSE SLIYADIVKN GDTIRIINMH LASYRFNERD YRSIEKIKKQ EDTGLVATRN IVQKMRDAYV DRSKQADIVS AFISTCPYPV ILCGDFNDTP ASYTYFTIRG DLQDAFLRKG SGIGRTYAGL APTLRIDYIF TDKSFKVNSF RKINSTLSDH YPVIANVSAR R
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