| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0855 |
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| Symbol | |
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| ID | 8356969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1025541 |
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| End bp | 1026161 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644963009 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_003120554 |
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| Protein GI | 256419901 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.908552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAT CCCCCGAAGT ACATCTGGTG CATCTCAGTA AGGATAAAAA GCTGGCGGGT
ATTATGACGG AGCCGCTGCC GGCACTGAAT GTCCAGAAGA ATATTGCCTT GAAGCTGATT
GGTTCTATTA TGAGTCAGCA GTTAAGTGTA AAAGTAGCAA CCGTTATTTA TACCCGCTTT
CTCGCCTTGT ATGATGGCAA AGAACCCAAC GCACAACAGA TACTGGATAC ACCACCGGAA
ACACTCCGCA GTATCGGATT ATCCAACGCA AAAGTGAGTT ATGTACACAA TGTGGCGCGC
TTCACTGTAG AAGAGAAATT AACGGATAAA AAACTGTTGC AGATGGATGA TGAAGAAGTG
ATTAAATATC TCACACAAAT CAAAGGTGTA GGTCGCTGGA CAGTAGAAAT GTTGTTGATG
TTTTACCTGT GCAGAGAAGA TGTTTTTGCG ATAGATGATC TGGGTTTACA ACAGGCCATG
ATCAAGCTAT ACAAACTGGA TAATACAGAT AAAAAAGCAT TCCGGGAAAA GTTGCTGAAG
ATATCGAAAA AATGGTCGCC TTACAGGACT TATGCAAGCA GGTATTTATG GGCATGGAAG
GATATGAAAC CAACGAATTA A
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| Protein sequence | MRQSPEVHLV HLSKDKKLAG IMTEPLPALN VQKNIALKLI GSIMSQQLSV KVATVIYTRF
LALYDGKEPN AQQILDTPPE TLRSIGLSNA KVSYVHNVAR FTVEEKLTDK KLLQMDDEEV
IKYLTQIKGV GRWTVEMLLM FYLCREDVFA IDDLGLQQAM IKLYKLDNTD KKAFREKLLK
ISKKWSPYRT YASRYLWAWK DMKPTN
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