Gene Cpin_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0849 
Symbol 
ID8356963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1017591 
End bp1019747 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content46% 
IMG OID644963003 
Producthypothetical protein 
Protein accessionYP_003120548 
Protein GI256419895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA ATCTGCTGAT CCTTCTGTTC CTGCTGGCGG CTCAATTCGC CAAAGCAGAT 
GAAGGAATGT GGCTGCCCTA TTTATTGGGA CAGCAAGTGT ACAATGATAT GGTGAAGAAA
GGTCTCAAGT TGACGAAAGA ACAATTGTAC AGTATCAACA AAGCGTCCCT GAAAGACGCC
ATTATCATCT TCGGTGGCGG ATGCACCGGG GAAATAGTGA GCAACCAGGG GCTGATTTTC
ACCAACCACC ACTGCGGTTA CGACGCCATC GCTACCGCCA GCTCCGTTGA GCACAATTAC
CTGAAAAATG GTTTCTACGC CCTGGATAAA AGCCAGGAAA TTCCTGCAAA AGGGCTGTCC
GTTCAATTTC TCGTAAAAGT AGATGATGTT ACCAAACAGG TAATGGACGG TCTGAAAGAC
CTCTCCGGTC CGGAAAGAAT GCAGCAACAG CAAAAAATCA TCGGAGACAT CGTTAGCCAG
GCCATCAATG GCACCAACTA CGAAGCGAAA GTACTTCCTA TCTTCAAAGG CAACCAGTAC
CTGCTTTTCG TGTATGAGCG CTATAAAGAC ATCCGTCTGG TAGGCGCCCC TCCGGAAAGC
ATCGGCAAAT TCGGCGGCGA TACGGATAAC TGGGAATGGC CCCGTCACAC CGGCGATTTC
TCCGTATTCC GTGTGTACGC TGATAAAGAT GGTAAACCTG CTGATTATTC CGCAGCGAAT
TTACCTTTGA AACCAAAACA TTTCCTCCCT GTTTCTATCA AAGGAATTAA AGAGAATGAT
TACGCAATGA TCTTCGGTTA TCCGGGCGGT ACCAACCGTT ACGAAAGCTC CGAAGGCGTA
AAACTGAAAA TAGACGTAGA AAACCCTTCT ATTGTAGCAC TGCGTGCAGT ACGTCTCTCC
TACATGTTTG AGCAGATGAA AAAAGATCCG GCTATCAAGC TGAAACTGGC GTCTTCTTAT
GCCGGTATCG CTAATTACTG GAAATTCTTT GATGGTGAAG CTAAACAGCT GGTTAAATAC
CATGTGGTAG ATGAGAAACA AAAAGAGGAA GCGGCATTTG GTAAATGGGC AAACGGTAAA
ACCGAATACG CGAATATCTT CGCTGACTAT GCCACTAACT ATAAAGCGTG GGCGCCATAT
GCAAAACATC GTATTTACAT CAATGAAGGC ATTATGGGCT CTCCACTGGC AGCTTTTGCA
GCCAGCCTTC AGGCAGTGGA AAAAGCGATG GTACAGTCAG GCGGTTCTGC TGAGGCGATT
AAGCAGAGCA TTCAGGCGGC TGATAAAGCA CGTACCGTAT TCCTGGAAGA AGAAGACAAA
ACCAGCGATC AGAAAATACT GGCAGCTACC TGTCACCTGT TCTACACTGA TATTCCTGTC
GCACAGCATC CTATCGGATT CTACGATGCC ATCAAGGCAA AATTTGGTAG TCTGGATGAT
AACAATACCT ACCGCCTCTG GGCTTCCGCT ATCATGTCGG GATCTATGAT CATGAATGAT
GCACGCTGGA AAGCTTTCGT GGCCAATCCG GATGCAGTAA CCCTGCAAAC CGATCCTGCA
TTCGCATACT CCAGTGCTTT CGTTAAAAAT TTCAGCACCA AATATCTGTC GATATACAAC
CAGTTTGTAA CTAAAAACAA CGACCTGGGA CGTACTTATA TGAAGGGTAA ACTGGAGATG
GAACCTAACA AAAAATGGTA TCCTGATGCG AATTTCTCTA TGCGTCTGAC CTATGGTCAG
GTAAAACCAT ATGCGCCACG TGATGCAGTA GCATATGATT ACGTATGTAC GATGAAAGGT
GTGATGGAAA AATATAAACC AGGCGATTAC GAATTCGATC TTCCGGAAAA TTATGTTTCC
CTCTACAACA AGAAAGACTT TGGTCAATAC AAAGACCTCA GAAAAAATGA TATCGTTACC
TGCTTCATTA CCACCAACGA TATTACAGGT GGTAACTCAG GTTCTCCTGT ACTGAATGCA
AACGGTGAAC TGATCGGTCT TGCATTTGAC GGTAACTACG AGGCACTGAG CCATAAAATA
CAGTTTGATG CCGTGTACAA TCGTACCATC TGTGTGGATG TACGCTATGT GCTGTGGTGT
ATCGATAAAC TGGGCGGCGC CAGCAACATT ATCAATGAGC TGAAGCTGAT CAGGTAA
 
Protein sequence
MKKNLLILLF LLAAQFAKAD EGMWLPYLLG QQVYNDMVKK GLKLTKEQLY SINKASLKDA 
IIIFGGGCTG EIVSNQGLIF TNHHCGYDAI ATASSVEHNY LKNGFYALDK SQEIPAKGLS
VQFLVKVDDV TKQVMDGLKD LSGPERMQQQ QKIIGDIVSQ AINGTNYEAK VLPIFKGNQY
LLFVYERYKD IRLVGAPPES IGKFGGDTDN WEWPRHTGDF SVFRVYADKD GKPADYSAAN
LPLKPKHFLP VSIKGIKEND YAMIFGYPGG TNRYESSEGV KLKIDVENPS IVALRAVRLS
YMFEQMKKDP AIKLKLASSY AGIANYWKFF DGEAKQLVKY HVVDEKQKEE AAFGKWANGK
TEYANIFADY ATNYKAWAPY AKHRIYINEG IMGSPLAAFA ASLQAVEKAM VQSGGSAEAI
KQSIQAADKA RTVFLEEEDK TSDQKILAAT CHLFYTDIPV AQHPIGFYDA IKAKFGSLDD
NNTYRLWASA IMSGSMIMND ARWKAFVANP DAVTLQTDPA FAYSSAFVKN FSTKYLSIYN
QFVTKNNDLG RTYMKGKLEM EPNKKWYPDA NFSMRLTYGQ VKPYAPRDAV AYDYVCTMKG
VMEKYKPGDY EFDLPENYVS LYNKKDFGQY KDLRKNDIVT CFITTNDITG GNSGSPVLNA
NGELIGLAFD GNYEALSHKI QFDAVYNRTI CVDVRYVLWC IDKLGGASNI INELKLIR