Gene Cpin_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0836 
Symbol 
ID8356950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1001603 
End bp1002181 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID644962990 
Producthypothetical protein 
Protein accessionYP_003120535 
Protein GI256419882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA ACATTATCGC TTGCCTTGCG CTGGCATTTG CTATGCTTAC CGTTTCCTGT 
GGTAAAGACG GGGATACCGG TCCACAGGGC GAACAAGGTG CTCCAGGTCC CGCTGGTCCT
GCCGGTCCTG CTGGTCCTCA AGGCCCCGAG GGTTCCGCTA ATGTGATCTA TTCAGATTGG
CTGGACGTAG CTTATGAAGC AGATACAATT CATACTTCAG GTGGCGGTAT TGATACCGTT
GGTTATATTG CACAGATAGA TGTAGCAAAA CTTGATCTGA ATATGTTGAC TAACGGGGAG
ATCAAAGTAT ATCTCAATGG TTTCAGTGCA GCTGATCCGA CTGTTATACC ACTGCCTTAC
TTCAACATTT ACACTAGTCT GAGCATCAAC CCGATCTTCT ACCTGAATAC GATCGAATTG
TATTCCAATG GCGATATCAG TACTGTGCAG GATAATGCGG GTACAAAATA TCAGCAATAC
CGTTATGTGC TGATCCCTGG TGGAGAAGAA GCGCGTAAAG CGAAAATTGA CTGGAATAAT
TATGAAGAGG TGAAGAAATA CCTGAACCTG AAGAACTAA
 
Protein sequence
MSFNIIACLA LAFAMLTVSC GKDGDTGPQG EQGAPGPAGP AGPAGPQGPE GSANVIYSDW 
LDVAYEADTI HTSGGGIDTV GYIAQIDVAK LDLNMLTNGE IKVYLNGFSA ADPTVIPLPY
FNIYTSLSIN PIFYLNTIEL YSNGDISTVQ DNAGTKYQQY RYVLIPGGEE ARKAKIDWNN
YEEVKKYLNL KN