| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0819 |
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| Symbol | |
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| ID | 8356932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 981738 |
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| End bp | 983477 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644962972 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003120518 |
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| Protein GI | 256419865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.157641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTC AGATAAAACA GAAGGGACCT GTGTATGATA TCTGCATTGT TGGTTCAGGT
GCAGGTGGCG GTATGGCTGC TAAAATACTC TCTGAAGCCG GACTTAAAAT AGCCCTCCTG
GAAGCAGGGC CGAAATACGA TCCGGCTGAT CCGCAACAAA TTACCCAGTT GAAATGGCCC
TACGCATCTC CCCGCAGAGG CGCTACCACG ACCCGCCCAT TTGGCGATTT TGATGCTGCT
TACGGTGGAT GGGAGATCGA AGGAGAACCT TACACAGCCA AAGATGGGAC AAAGTTTGAC
TGGTTCCGCT CCCGCATGGT AGGTGGACGT ACCAATCACT GGGGACGTAT TTCCCTGCGC
TTCGGTCCAA GGGATTTTAA ACATAAAAGT TATGACGGTC TGGGTGATGA CTGGCCTCTC
AGCTATGAGG ATGTCGCTCC GTACTATGAC CGTGTTGATA AAATGATCGG CGTATTTGGC
ACCCGGGAAG GGATGGCCAA TGAGCCGGAC GGGTTCTTTC TGCCTCCTCC CAAACCGAGA
CTGCATGAAC TGATGCTGAA GAAAGCGGGA GATAAACTGA AGATTCCGGT GATCACCTCG
CGTATGTCTA TGCTGACAAG ACCTGTAAAT AAAGAGCGTA GCGCCTGTTT CTTCTGCGGA
CAATGTAACC GTGGCTGCCA GGTATACGCT GACTTCTCCT CTTCTTCCGT ACTTGTCAAA
CCAGCTATGA AAAGCGGACA TGTCGATCTT TACGACAACG CCATGGCCAG GGAAGTGCTC
ACTGATAAAG AAGGAAAGGC AACAGGTGTG GCATATGTCG ATAAAACAGA TCTCCAGGAA
TATGTGGTGA ATGCCCGGGT CATCGTACTC GCAGCCAGCG CCTGTGAATC TGCCCGTCTG
CTGCTGAACT CAAAATCATC CAGATTCCCT AACGGATTAG CCAACTCCAG CAATGTTGTT
GGTAAATACC TGCACGACTC TACCGGTTCC TCCCGCGCAG CCTTTATGCC GCAACTTGTA
GGCCGTAAGC GCTACAATGA AGACGGCGTA GGTGGCATGC ACGTGTACAT TCCCTGGTGG
GAAGACAATA AAAAACTGGA CTTCGCCCGT GGATATCATA TAGAATTCGG CGGTGGCATG
CGTATGCCAT CTTACGGCGG GTTTACCGGC ATAGATCGGC TGAATGGCAA ATATCCGGGC
AGTGATGGCA AAATTAAACC TGCTGGTGGA TATGGTGTTG CGCTGAAAGA CGATTATCGT
CACTTTTACG GTGCAACCGT CGGTATGGCC GGCAGAGGTG AATGTATTGC CCGTGAGGAC
AACTATTGTG AAATAGATCC GAAGGTTGTG GATAAATGGG GGATTCCCGT ACTGCGTTTC
AATTATACCT GGAGTGATCA TGAGATCAAA CAGGCCAAAC ACATGCAGGA TACCTTTGAT
CAGCTGATCC ATGAAATGGG TGGCGTACCA CTGGGGACCA AACCTGGTCC TGAAACAAAC
TACGGACTGG AAACCCCTGG CAGGATCATT CACGAAGTAG GTACTACCCG TATGGGCGAT
GATCCGAAAC GCTCCGTACT TAATAAGTAT AACCAGGCGC ACGATGTGAA AAACCTGTTT
GTTGTAGATG GTGGTCCGTT TGTGTCTCAG GCTGATAAAA ATCCAACCTG GACCATTCTG
GCATTATCAC TCCGTGCTTC TGAATACATG ATGAGTGAAC TGAAAAAGCA AAACCTTTAA
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| Protein sequence | MAFQIKQKGP VYDICIVGSG AGGGMAAKIL SEAGLKIALL EAGPKYDPAD PQQITQLKWP
YASPRRGATT TRPFGDFDAA YGGWEIEGEP YTAKDGTKFD WFRSRMVGGR TNHWGRISLR
FGPRDFKHKS YDGLGDDWPL SYEDVAPYYD RVDKMIGVFG TREGMANEPD GFFLPPPKPR
LHELMLKKAG DKLKIPVITS RMSMLTRPVN KERSACFFCG QCNRGCQVYA DFSSSSVLVK
PAMKSGHVDL YDNAMAREVL TDKEGKATGV AYVDKTDLQE YVVNARVIVL AASACESARL
LLNSKSSRFP NGLANSSNVV GKYLHDSTGS SRAAFMPQLV GRKRYNEDGV GGMHVYIPWW
EDNKKLDFAR GYHIEFGGGM RMPSYGGFTG IDRLNGKYPG SDGKIKPAGG YGVALKDDYR
HFYGATVGMA GRGECIARED NYCEIDPKVV DKWGIPVLRF NYTWSDHEIK QAKHMQDTFD
QLIHEMGGVP LGTKPGPETN YGLETPGRII HEVGTTRMGD DPKRSVLNKY NQAHDVKNLF
VVDGGPFVSQ ADKNPTWTIL ALSLRASEYM MSELKKQNL
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