| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0810 |
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| Symbol | |
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| ID | 8356923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 972371 |
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| End bp | 973303 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962963 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003120509 |
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| Protein GI | 256419856 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0113296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA GAAAATTCCT TCAGCAGAGC ACATTGGCAG GTCTCTCTAC GCTGGCAGCA
GGCAGTGCCG CAGCAGCAAC CCATCATTCC TTCAATGAGA AGGAGAAAGA ACAGGCAGGC
AAAACCTTCA ATCTCAACTA TGCCCCTCAT GACGGTATGT TTAAAAACAG TGGCGGCGAC
AGCTTCCTCG ATCAGATACA GTTCATGTAT GATCAGGGCT TCCGTTCCAT TGAAGACAAC
GGCATGATGA AAAGAGATAC GGCAGAACAG GAGAAGATCG GTAAACTGCT CAGCAAACTC
GGTATGCAGA TGGGGGTATT TGTGATCGAT GCGGGCGACA ACTGGAAGGT TTCTCTGACC
AGCGGCAAAC AGGAGTTTAA AGACGCCTTT GTAAAAGAAT GTAAACGGGC ACTTGAAACC
GCCAAACGTG TCAATGCCAA ATGGGCGACC GTAGTGCCGG GCTATTTTGA ACGTAACCTG
CCGATCGGCG TACAAACGGC ACATGTAATC GAAGCCTTCC GCGCAGGAGC AGGCGTACTG
GAAAAAGAAG GACTGGTAAT GGTGATGGAG CCCCTGAGCG ACAATCCTGA CCTGTTTCTG
CGTACCGCAG AACAAAGTTA TGGCATCTGT AAAGCGGTCA ACAGCCCAAG CTGTAAAATA
CTCTACGATA TCTACCATAT GCAGCGCAAT ACCGGCAACC TGATCCCTGT AATGGACATG
TGCTGGGATG AAATTGCCTA TATCCAGATC GGTGATAATC CTGGCCGTAA GGAACCGACC
AGCGGTGAGA TCAACTACAA AAATATTTTC AAACACCTGC ACAAGAAAGG TTTCAAAGGT
ATCCTGGGCA TGGAACATGG TAATGCCAAT CCGGGAAAAG AAGGCGAACA GGCGCTCATA
AAGGCATACC GCGAAAGTGA CGATTTTCTG TAA
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| Protein sequence | MERRKFLQQS TLAGLSTLAA GSAAAATHHS FNEKEKEQAG KTFNLNYAPH DGMFKNSGGD
SFLDQIQFMY DQGFRSIEDN GMMKRDTAEQ EKIGKLLSKL GMQMGVFVID AGDNWKVSLT
SGKQEFKDAF VKECKRALET AKRVNAKWAT VVPGYFERNL PIGVQTAHVI EAFRAGAGVL
EKEGLVMVME PLSDNPDLFL RTAEQSYGIC KAVNSPSCKI LYDIYHMQRN TGNLIPVMDM
CWDEIAYIQI GDNPGRKEPT SGEINYKNIF KHLHKKGFKG ILGMEHGNAN PGKEGEQALI
KAYRESDDFL
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