Gene Cpin_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0788 
Symbol 
ID8356901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp956016 
End bp956384 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content43% 
IMG OID644962941 
Productphenylacetic acid degradation B 
Protein accessionYP_003120487 
Protein GI256419834 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3460] Uncharacterized enzyme of phenylacetate metabolism 
TIGRFAM ID[TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.12801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAT CACTGGATCC ACGTGTTAAC CGGCTACGGT TAAATAATAG TGACGGCTCC 
TTCAGCATCG AAGAGGGCGA AAACTGGAAT GTATTCGAAG TATTTCACCA GGAAAAAAGA
GGTGCGCATC ATGAGCATGT CGGTTGTGTA CATGCCCCTG ACGCAAATCT TGCATTGATT
TTTGCCAAAG AACAATTTGG CCGCAGGAAA AAATGTGTGA ACCTATGGGT CGTACGTAGT
GCAGATATTC TTGCATTCGA CCTGGAAGAT GAAGACATGT TTGCCAACAA TCCGGATAAA
ACTTACCGGG ATGCCAGCGG ATTTAAAGTC ATGGAAAAGA TCAACAAATT TAAAGCACAG
TCAAAATAG
 
Protein sequence
MNESLDPRVN RLRLNNSDGS FSIEEGENWN VFEVFHQEKR GAHHEHVGCV HAPDANLALI 
FAKEQFGRRK KCVNLWVVRS ADILAFDLED EDMFANNPDK TYRDASGFKV MEKINKFKAQ
SK