Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0788 |
Symbol | |
ID | 8356901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 956016 |
End bp | 956384 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644962941 |
Product | phenylacetic acid degradation B |
Protein accession | YP_003120487 |
Protein GI | 256419834 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.12801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT CACTGGATCC ACGTGTTAAC CGGCTACGGT TAAATAATAG TGACGGCTCC TTCAGCATCG AAGAGGGCGA AAACTGGAAT GTATTCGAAG TATTTCACCA GGAAAAAAGA GGTGCGCATC ATGAGCATGT CGGTTGTGTA CATGCCCCTG ACGCAAATCT TGCATTGATT TTTGCCAAAG AACAATTTGG CCGCAGGAAA AAATGTGTGA ACCTATGGGT CGTACGTAGT GCAGATATTC TTGCATTCGA CCTGGAAGAT GAAGACATGT TTGCCAACAA TCCGGATAAA ACTTACCGGG ATGCCAGCGG ATTTAAAGTC ATGGAAAAGA TCAACAAATT TAAAGCACAG TCAAAATAG
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Protein sequence | MNESLDPRVN RLRLNNSDGS FSIEEGENWN VFEVFHQEKR GAHHEHVGCV HAPDANLALI FAKEQFGRRK KCVNLWVVRS ADILAFDLED EDMFANNPDK TYRDASGFKV MEKINKFKAQ SK
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