Gene Cpin_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0784 
Symbol 
ID8356897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp951176 
End bp953311 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content48% 
IMG OID644962937 
Productferrous iron transport protein B 
Protein accessionYP_003120483 
Protein GI256419830 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.155196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAA CAAAAAAAGC TACGATCAAT ATCGCGTTGG TAGGGAATCC GAATAGTGGG 
AAAAGTTCGC TCTTTAATGC GCTGACAGGT CTGAACCAGA AAGTCAGCAA CTTTCCAGGG
GTAACTGTTG ATAAAAAAAC AGGGGCCGCT ACTATCTCGT CCTCCCTCCA GGCCAATATT
ATCGATCTGC CAGGAACCTA CAGCCTGTAT CCTAAAAGCG CTGACGAGTT TGTTACCTAC
GATGTACTCG TTCATCCTGC CGCTGATGAA CAACCGGACA TGATCCTGAT CATAGCCGAT
GCCTCCAACC TGAAACGTAA CCTGCTCTTC TGCTCCCAGA TCATGGACCT GAAAATTCCG
GTGATCATCG GTCTTACCAT GATGGACATT GCCCGCAAAA AAGGCGTCGA AATAGACGAA
GCCGGTCTCG AAAGAGAACT GGGGGTGCCT ATTGTGAGCA TCAACCCCCG TAAAAACAAA
GGGGTAACGG AGCTGAAAAA GATGATAGAC CTCGTCGCTA AGGAGAAACA ATCCGTAGCA
CCGAGAGATT TCATTGATAG TCAGGCTTTA GCACCGGAGG TAATCCAGGA GATCAGGAAA
TATGTACAGG TAAAAAGCGA TTATGCCGCT ATGCATATCG CCGTGAACCA TCATGAACTG
GCATTTCTGA ACGGCGGACA AAAACTCGCC ATCACCAATA TCCTGCAAAC GCACCAGTTC
AATAAGACCA AGGTGCAGGC AGAAGAGATC ATGCAGCGCT ATGCCAGGAT CAAACACATC
ATGAAGAATA CCGTGGTGGA AGCCGATCCT TTGCAGAAAC AGTTACAAAC CGAGAAACTC
GATAACATAT TACTCCACCG CTTCTGGGGA TACATGATCC TGTTGGGTAT CATGTTCTTT
ATGTTCCAGA GTATTTTCTG GCTGGCATCC TTTCCGATGG ACTGGATTGA GGCTGGTTTT
GGCTGGTTAA GTGGCTGGCT TACAGGGGCT TTACCTGCCA ATCAGCTGAC AGACATCCTG
GTGAACGGGG TGATTGCCGG TCTGGGAGGT ATCGCCGTAT TCGTGCCGCA GATCATGATC
CTCTTCGCCT TTATCACCGT GCTGGAAGAT ACAGGGTATA TGGCCAGGAT CAGTTTCCTG
ACGGACAGAC TGATGCGACA GGTAGGACTG AACGGTAAAT CTGTGATGCC CCTGATCAGC
GGGGTTGCCT GTGCCGTGCC GGCAATCATG GCGACCAGGA ATATTGAAAA CAGGAAAGAG
CGCCTGATCA CGATTCTCAT TACCCCTTTA ATGAGCTGTT CCGCGCGTTT GCCTATTTAT
ACGGTGATGA TTGCCCTGGT GGTTCCGGAC AGACCTGTAT TTGGCTTCCT GAGTCTGCAG
GGACTGGTGA TGATGGGATT GTATCTGCTG GGTTTTGTGA TGGCACTGTT CATCGCTGCA
ATACTGAAGT TATTCATCAA GATAAAAGAA AAGAGCTATT TCATCATGGA ACTGCCGGTA
TACCGTGCGC CCCGTTGGGC AAACGTAGGT ACCACCATGG TGCAGAAAGC AAAAATCTTC
ATTACAGATG CCGGTAAGGT GATCATGGTG ATCTCTATCG TACTCTGGTT CCTGGCATCT
TTCGGTCCTA AAGACAGGAT GGAAAAGGTG ACTGCGCATT ATGAACAACT GAAAACAGCA
CATCCGGAAC AAAGCGAAGC ACTGGATATG GAAATGCAAT CTGAAAAGCT GGGTAATTCC
TATGCAGGCG TACTGGGACA TGCGATTGAA CCAGTGATTC GTCCGCTGGG TTATGACTGG
AAAATTGGTA TTGCATTAAT TACTTCCTTT GCCGCACGTG AGGTATTTGT GGGTACAATG
GCTACGCTGT ATAGTGTAGG AGAATCCCCG GAAGATAACG ATGCAACCCT GAGAGAGAAA
ATGACCAACG CCACCTGGAA GGACGGACGT CCGGTATATA CACTTGCAAG CGGTATTTCC
CTGATGTTGT TCTACGCCTT TGCCATGCAG TGTATGAGTA CACTGGCGAT TGTAAAGAGA
GAAACCAAAT CATGGAAAAT GCCAGCCATA CAATTTGTGT ACATGACAGC GCTGGCATAT
ATCTCTGCAT TGATTGCTTT CCAGCTGCTG AATTAA
 
Protein sequence
MQATKKATIN IALVGNPNSG KSSLFNALTG LNQKVSNFPG VTVDKKTGAA TISSSLQANI 
IDLPGTYSLY PKSADEFVTY DVLVHPAADE QPDMILIIAD ASNLKRNLLF CSQIMDLKIP
VIIGLTMMDI ARKKGVEIDE AGLERELGVP IVSINPRKNK GVTELKKMID LVAKEKQSVA
PRDFIDSQAL APEVIQEIRK YVQVKSDYAA MHIAVNHHEL AFLNGGQKLA ITNILQTHQF
NKTKVQAEEI MQRYARIKHI MKNTVVEADP LQKQLQTEKL DNILLHRFWG YMILLGIMFF
MFQSIFWLAS FPMDWIEAGF GWLSGWLTGA LPANQLTDIL VNGVIAGLGG IAVFVPQIMI
LFAFITVLED TGYMARISFL TDRLMRQVGL NGKSVMPLIS GVACAVPAIM ATRNIENRKE
RLITILITPL MSCSARLPIY TVMIALVVPD RPVFGFLSLQ GLVMMGLYLL GFVMALFIAA
ILKLFIKIKE KSYFIMELPV YRAPRWANVG TTMVQKAKIF ITDAGKVIMV ISIVLWFLAS
FGPKDRMEKV TAHYEQLKTA HPEQSEALDM EMQSEKLGNS YAGVLGHAIE PVIRPLGYDW
KIGIALITSF AAREVFVGTM ATLYSVGESP EDNDATLREK MTNATWKDGR PVYTLASGIS
LMLFYAFAMQ CMSTLAIVKR ETKSWKMPAI QFVYMTALAY ISALIAFQLL N