Gene Cpin_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0782 
Symbol 
ID8356895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp948814 
End bp949140 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content44% 
IMG OID644962935 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003120481 
Protein GI256419828 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAG ATAACACACA ATCACAGATG AGAAAGGGGG TGCTTGAGTT CTGCATCCTG 
TCGATCATCA AGCAAGGAGA AGCTTATCCT TCAGACATTA TCGAAAAAAT GAAAGAAGCA
AAGCTGGACA TCCTGGAGGG CACCCTTTAC CCACTGCTTA CCCGACTTAA AAACGCAGAA
TTACTGACTT ACCGATGGGT TGAAAGTAAT TCAGGTCCTC CAAGGAAATA TTTTTCCATG
ACCGACAAGG GAGAACTCTT CTACAAGGAA CTGGAAACGA CCTGGAACGA GCTGGCCAAT
GCAGTAACAC AGCTCACAAG TCAATAA
 
Protein sequence
MNIDNTQSQM RKGVLEFCIL SIIKQGEAYP SDIIEKMKEA KLDILEGTLY PLLTRLKNAE 
LLTYRWVESN SGPPRKYFSM TDKGELFYKE LETTWNELAN AVTQLTSQ