| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0780 |
|---|
| Symbol | |
|---|
| ID | 8356893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 946292 |
|---|
| End bp | 947938 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962933 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_003120479 |
|---|
| Protein GI | 256419826 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.783014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGC AATCCATATT TTCCAATGTT AAAGGTGACC TTTCTGCCGG CCTTGTTGTA
TTTCTGATTG CGGTTCCGCT GTGTCTGGGT ATAGCCCTGG CATCTGGCGC ACCCTTGTTT
TCTGGTATGA TCGCCGGCAT CGTAGGTGGG TTGGTAATTG GTTCCCTGAG CGGATCTCAA
CTAAGTGTAA GTGGTCCCGC TGCAGGCCTT ACCGCTGTAG TATTGACAGC AATTACAAAA
TTTGGCGTAT TTGAAGTTTT CCTGTTAGCC GTTGTGATCG GTGGTGTTAT ACAATTGGCG
CTCGGCCTTT TAAAGGCGGG TATCGTTGCT AACTATTTCC CATCCAACGT TATCAAGGGT
ATGCTGACAG CAATTGGTAT TATTATTATA CTGAAACAGC TGCCACATGC CTTTGGTTAT
GATGCTGATT CGGAAGGCGA CTTCGCTTTT ATACAGGTAG ATGGAGACAA CAGTATCACT
GCTTTACTCT CTACCCTGAA TCACATTCAC CTGGGTGCTA CCCTGATTAC CATCGTATCT
GTACTGATCA TCCTTTACTG GAGCAAGATC CCTAAAGTGA ACGTGGTACC GGCTCCCCTG
GTGGCTGTAC TGACAGGTGT CGGACTCAAC ACACTTTTCA TTGCCACCGG TAGTGTACTG
GCTGTTGCAC CGTCTCACCT GGTAAATCTG CCCGTTGCAA GCGATTTTAA TTCATTCATT
GGTCAGTTCA CACTTCCTGA CTTCAGTGCT ATTACCAATA AAGAGGTTTG GATCGTTGGC
GCCACTATCG CAATAGTAGC GTCTATTGAA ACCCTCCTGA ACCTGGAAGC GACAGACAAG
CTGGATCCCC TGAAACGTCA TTCTCCCCCT AACCGTGAAT TACAGGCACA AGGTATCGGT
AACATCATCA GTGGTATGCT GGGCGGTCTG CCGGTTACAT CCGTAATCGT ACGTTCCTCT
GCAAATATCA ACTCAGGCGC CCGTACCAAA CTGTCTGCTA TCTCGCACGG GGCTTTGCTG
TTAGTTTGTG CAGCCTTCAT TCCTACCCTG CTGAACAAAA TACCACTGGC CACCCTCGCC
GCTGTACTGC TGGTAACCGG ATACAAACTG TGTAAGATTT CCATTTTCAA GGAAATGTTC
AAAAACGGTA AGTATCAATG GATTCCATTC GTTGTAACAG TTGTTGCGAT CGTATTTACC
GATCTGCTGA TCGGTATTTC CCTGGGTATG GCTGTCAGCG TAATTGCCAT TCTCCGTGGT
AACATCCGTA GTTCTTACTT TTTCCGTAAG GAGAAATATA AAGCCGGCGA AAGCATTATT
CTGGAACTTG CACAGGAAGT TTCCTTCCTG AATAAAGCCA GTATTTTGCT GACGCTCGAC
CATATGCCGG AAAATTCTAC TGTGGTTATT GACGGAAGTA AAACCACATA CATAGATTTT
GACGTATTAG AAACTATACG AGAGTTCAAA GAGGTAAAAG CTGTGCAAAA AAACATCACA
GTAATTATCA CTGGTTTCAA GGAACAGTAT AAACTGGCTA ACACTGAAAA TATTTCCCCC
GAGCAGCAGG AGAAAATAGC CAGTGGCCAT GTACATACCA TCACCGGTAA CCATGAACAA
TTGTTGAAGG AGCTTCAGCT GAACTAA
|
|---|
| Protein sequence | MSRQSIFSNV KGDLSAGLVV FLIAVPLCLG IALASGAPLF SGMIAGIVGG LVIGSLSGSQ
LSVSGPAAGL TAVVLTAITK FGVFEVFLLA VVIGGVIQLA LGLLKAGIVA NYFPSNVIKG
MLTAIGIIII LKQLPHAFGY DADSEGDFAF IQVDGDNSIT ALLSTLNHIH LGATLITIVS
VLIILYWSKI PKVNVVPAPL VAVLTGVGLN TLFIATGSVL AVAPSHLVNL PVASDFNSFI
GQFTLPDFSA ITNKEVWIVG ATIAIVASIE TLLNLEATDK LDPLKRHSPP NRELQAQGIG
NIISGMLGGL PVTSVIVRSS ANINSGARTK LSAISHGALL LVCAAFIPTL LNKIPLATLA
AVLLVTGYKL CKISIFKEMF KNGKYQWIPF VVTVVAIVFT DLLIGISLGM AVSVIAILRG
NIRSSYFFRK EKYKAGESII LELAQEVSFL NKASILLTLD HMPENSTVVI DGSKTTYIDF
DVLETIREFK EVKAVQKNIT VIITGFKEQY KLANTENISP EQQEKIASGH VHTITGNHEQ
LLKELQLN
|
|---|
| |